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Characterization and genome analysis of lytic Vibrio phage VPK8 with potential in lysing Vibrio parahaemolyticus isolates from clinical and seafood sources.
Virol J
January 2025
Division of Biological Science, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90110, Thailand.
Background: Vibrio parahaemolyticus is a marine bacterium causing seafood-associated gastrointestinal illness in humans and acute hepatopancreatic necrosis disease (AHPND) in shrimp. Bacteriophages have emerged as promising biocontrol agents against V. parahaemolyticus.
View Article and Find Full Text PDFRisk-directed management of chronic kidney disease.
Nat Rev Nephrol
January 2025
New York University Grossman School of Medicine, New York, NY, USA.
The timely and rational institution of therapy is a key step towards reducing the global burden of chronic kidney disease (CKD). CKD is a heterogeneous entity with varied aetiologies and diverse trajectories, which include risk of kidney failure but also cardiovascular events and death. Developments in the past decade include substantial progress in CKD risk prediction, driven in part by the accumulation of electronic health records data.
View Article and Find Full Text PDFVersatile waste sorting in small batch and flexible manufacturing industries using deep learning techniques.
Sci Rep
January 2025
School of Electrical Engineering, University of Belgrade, Bulevar Kralja Aleksandra 73, Belgrade, Serbia.
The expansion of LEAN and small batch manufacturing demands flexible automated workstations capable of switching between sorting various wastes over time. To address this challenge, our study is focused on assessing the ability of the Segment Anything Model (SAM) family of deep learning architectures to separate highly variable objects during robotic waste sorting. The proposed two-step procedure for generic versatile visual waste sorting is based on the SAM architectures (original SAM, FastSAM, MobileSAMv2, and EfficientSAM) for waste object extraction from raw images, and the use of classification architecture (MobileNetV2, VGG19, Dense-Net, Squeeze-Net, ResNet, and Inception-v3) for accurate waste sorting.
View Article and Find Full Text PDFSample Preparation of Caenorhabditis elegans for GC-MS-Based Metabolomics in Toxicity Assessment.
Methods Mol Biol
January 2025
Fytagoras BV, Leiden, The Netherlands.
The nematode Caenorhabditis elegans, widely recognized as a model organism due to its ease of breeding and well-characterized genomes, boasts complete digestive, reproductive, and endocrine systems, as well as conserved signaling pathways shared with mammals. It has become an invaluable resource for metabolomics research, particularly in examining responses to chemical or environmental factors and toxicity assessments. In this article, we provide detailed, step-by-step protocols for cultivating C.
View Article and Find Full Text PDFExtraction, Annotation, and Purification of Resin Glycosides from the Morning Glory Family (Convolvulaceae).
Methods Mol Biol
January 2025
Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA.
The metabolic diversity of plants, comprising over a million different metabolites across the plant kingdom, harbors enormous potential for pharmaceutical and biotechnological applications. Resin glycoside (RG) acylsugars from the Convolvulaceae are of interest due to their medicinal and agricultural potential. However, understanding the biological relevance of RGs is challenging as they exhibit a high lineage-specific structural diversity.
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