Detection of infectious tobamoviruses in forest soils.

Appl Environ Microbiol

Faculty of Environmental and Forest Biology, College of Environmental Science and Forestry, State University of New York, Syracuse, New York 13210-2788.

Published: April 1998

AI Article Synopsis

  • The study aimed to evaluate methods for detecting infectious tobamoviruses in forest soils in New York, using samples from Whiteface Mountain and Heiberg Forest.
  • A phosphate buffer was found to be most effective for eluting the tomato mosaic tobamovirus from soil, with mineral soils showing higher virus retention than organic soils.
  • The research confirmed the presence of tobamoviruses in the sampled forest soils, highlighting the potential for these viruses to spread and persist within forest ecosystems through soil transmission.

Article Abstract

Our objectives were to evaluate elution and bait plant methods to detect infectious tobamoviruses in forest soils in New York State. Soils were collected from two forest sites: Whiteface Mountain (WF) and Heiberg Forest (HF). The effectiveness of four buffers to elute tomato mosaic tobamovirus (ToMV) from organic and mineral fractions of WF soil amended with ToMV was tested, and virus content was assessed by enzyme-linked immunosorbent assay (ELISA). The effectiveness of Chenopodium quinoa (Willd.) bait plants to detect the virus also was tested. Both methods then were utilized to detect tobamoviruses in 11 WF and 2 HF soil samples. A phosphate buffer (100 mM, pH 7.0) eluted more ToMV from soil than the other buffers tested. Mineral soil bound more virus than organic soil. Virus recoveries from virus-amended organic and mineral soils were 3 and 10%, respectively, and the detection sensitivity was 10 to 20 ng/g of soil. Roots of bait plants grown in all virus-amended soils tested positive by ELISA, and virus concentrations averaged 10 ng/g. Both ToMV and tobacco mosaic tobamovirus (TMV) were transmitted to C. quinoa by elution from one of two HF soil samples but not from the WF soil samples. A tobamovirus was detected by bait planting in 12 of 73 (16%) root extracts representing 5 of 13 soil samples (38%). Tobamovirus-like particles were seen by transmission electron microscopy in 6 of 12 infected root extracts. Tobamoviruses occur in forest soils in New York State. Abiotic soil transmission to trees may permit localized spread and persistence of these viruses in forest ecosystems.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC106165PMC
http://dx.doi.org/10.1128/AEM.64.4.1430-1435.1998DOI Listing

Publication Analysis

Top Keywords

soil samples
16
forest soils
12
soil
10
infectious tobamoviruses
8
tobamoviruses forest
8
soils york
8
york state
8
mosaic tobamovirus
8
organic mineral
8
bait plants
8

Similar Publications

Background: One of the tropical illnesses that is often overlooked is soil-transmitted helminths, or STHs. In tropical and subtropical nations, where poor sanitation and contaminated water sources are common, they mostly impact the most vulnerable populations.

Objective: The aim of this study was to ascertain the prevalence of STHs and related risk factors among the people living in Jigjiga town, Somali region, Eastern Ethiopia.

View Article and Find Full Text PDF

Extensive agricultural regions commonly face issues of poor groundwater management, non-standard agricultural production practices, and unordered discharge of domestic pollution, leading to a continuous decline in groundwater quality and a sharp increase in risks. A comprehensive understanding of groundwater conditions and pollution is a crucial step in effectively addressing the water quality crisis. This study employs the Comprehensive Water Quality Index, Irrigation parameter, and Pollution Index to comprehensively investigate the groundwater quality in a typical agricultural area in Shandong, China, and assesses the suitability of groundwater for irrigation and the risks to human health.

View Article and Find Full Text PDF

Detection of chronic wasting disease prions in the farm soil of the Republic of Korea.

mSphere

January 2025

WOAH Reference Laboratory for CWD, Foreign Animal Disease Division, Animal and Plant Quarantine Agency, Gimcheon, South Korea.

Chronic wasting disease (CWD) is a highly contagious prion disease occurring in free-ranging and farmed cervids. CWD continues to spread uncontrolled across North America, and cases continue to be detected almost every year in the Republic of Korea. CWD-infected animals contaminate the soil by releasing infectious prions through their excreta, and shed prions accumulate and remain infectious in the soil for years.

View Article and Find Full Text PDF

Iron(II/III) Alters the Relative Roles of the Microbial Byproduct and Humic Acid during Chromium(VI) Reduction and Fixation by Soil-Dissolved Organic Matter.

Environ Sci Technol

January 2025

Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtse River), Ministry of Agriculture and Rural Affairs, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China.

Though reduction of hexavalent chromium (Cr(VI)) to Cr(III) by dissolved organic matter (DOM) is critical for the remediation of polluted soils, the effects of DOM chemodiversity and underlying mechanisms are not fully elucidated yet. Here, Cr(VI) reduction and immobilization mediated by microbial byproduct (MBP)- and humic acid (HA)-like components in (hot) water-soluble organic matter (WSOM), (H)WSOM, from four soil samples in tropical and subtropical regions of China were investigated. It demonstrates that Cr(VI) reduction capacity decreases in the order WSOM > HWSOM and MBP-enriched DOM > HA-enriched DOM due to the higher contents of low molecular weight saturated compounds and CHO molecules in the former.

View Article and Find Full Text PDF

Magnesium (Mg) an essential plant nutrient is widespread deficient in the acidic soils of Nilgiris of Tamil nadu, India. The vegetable yield and quality is especially affected due to deficiency of nutrients like Mg. This study investigates soil characteristics and bacterial diversity in the Nilgiris district of Tamil Nadu, India, with respect to Mg deficiency.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!