The natural inhibitor proteins IF1 regulate mitochondrial F0F1 ATPsynthase in a wide range of species. We characterized the interaction of CaM with purified bovine IF1, two bovine IF1 synthetic peptides, as well as two homologous proteins from yeast, namely IF1 and STF1. Fluorometric analyses showed that bovine and yeast inhibitors bind CaM with a 1:1 stoichiometry in the pH range between 5 and 8 and that CaM-IF1 interaction is Ca2+-dependent. Bovine and yeast IF1 have intermediate binding affinity for CaM, while the Kd (dissociation constant) of the STF1-CaM interaction is slightly higher. Binding studies of CaM with bovine IF1 synthetic peptides allowed us to identify bovine IF1 sequence 33-42 as the putative CaM-binding region. Sequence alignment revealed that this region contains a hydrophobic motif for CaM binding, highly conserved in both yeast IF1 and STF1 sequences. In addition, the same region in bovine IF1 has an IQ motif for CaM binding, conserved as an IQ-like motif in yeast IF1 but not in STF1. Based on the pH and Ca2+ dependence of IF1 interaction with CaM, we suggest that the complex can be formed outside mitochondria, where CaM could regulate IF1 trafficking or additional IF1 roles not yet clarified.
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http://dx.doi.org/10.1007/s10863-005-8643-4 | DOI Listing |
Protein Sci
April 2024
Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, Tokyo, Japan.
IF , an inhibitor protein of mitochondrial ATP synthase, suppresses ATP hydrolytic activity of F . One of the unique features of IF is the selective inhibition in mitochondrial F (MF ); it inhibits catalysis of MF but does not affect F with bacterial origin despite high sequence homology between MF and bacterial F . Here, we aimed to engineer thermophilic Bacillus F (TF ) to confer the susceptibility to IF for elucidating the molecular mechanism of selective inhibition of IF .
View Article and Find Full Text PDFJ Biol Chem
March 2024
The Medical Research Council Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom. Electronic address:
The hydrolytic activity of the ATP synthase in bovine mitochondria is inhibited by a protein called IF, but bovine IF has no effect on the synthetic activity of the bovine enzyme in mitochondrial vesicles in the presence of a proton motive force. In contrast, it has been suggested based on indirect observations that human IF inhibits both the hydrolytic and synthetic activities of the human ATP synthase and that the activity of human IF is regulated by the phosphorylation of Ser-14 of mature IF. Here, we have made both human and bovine IF which are 81 and 84 amino acids long, respectively, and identical in 71.
View Article and Find Full Text PDFNat Commun
March 2023
Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, Bunkyo-ku, Tokyo, 113-8656, Japan.
IF is a natural inhibitor protein for mitochondrial FF ATP synthase that blocks catalysis and rotation of the F by deeply inserting its N-terminal helices into F. A unique feature of IF is condition-dependent inhibition; although IF inhibits ATP hydrolysis by F, IF inhibition is relieved under ATP synthesis conditions. To elucidate this condition-dependent inhibition mechanism, we have performed single-molecule manipulation experiments on IF-inhibited bovine mitochondrial F (bMF).
View Article and Find Full Text PDFJ Biochem
September 2021
Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.
ATPase inhibitory factor 1 (IF1) is a mitochondrial regulatory protein that blocks ATP hydrolysis of F1-ATPase, by inserting its N-terminus into the rotor-stator interface of F1-ATPase. Although previous studies have proposed a two-step model for IF1-mediated inhibition, the underlying molecular mechanism remains unclear. Here, we analysed the kinetics of IF1-mediated inhibition under a wide range of [ATP]s and [IF1]s, using bovine mitochondrial IF1 and F1-ATPase.
View Article and Find Full Text PDFAnimals (Basel)
August 2020
Department of Veterinary Science-University of Parma, Via del Taglio 10, I-43126 Parma, Italy.
Milk from different cattle breeds can present different casein and fat contents, which are reflected in different cheese yields (CY). However, CY is also related to some breed-related molecular characteristics. The aim of the present work was to quantify the effect of these characteristics by comparing a series of Parmigiano Reggiano (PR) cheese-making trials made with milks from Italian Brown (IB) and Italian Friesian (IF) cattle herds.
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