The interaction between molybdenum, atom, and dimer, with nitrous oxide has been investigated using density functional theory. The analysis of the potential energy surfaces for both reactions has revealed that a single molybdenum atom can activate the N--O bond of N2O requiring a small activation energy. However, the presence of several intersystem crossings between three different spin states, namely, septet, quintet and triplet states, seems to be the major constraint to the Mo + N2O reaction. Contrarily, the low-lying excited states (triplet and quintet) do not participate in the reaction between the molybdenum dimer and N2O. The latter reaction fully evolves on the singlet spin surface. Three different regions have been distinguished along the pathway: formation of an adduct complex, formation of an inserted compound, and the N2 detachment. The connection between the two first regions has been characterized by the formation of a special complex in which the N--O bond is so weakened that it could be considered as a first step in the insertion process. It has been shown that the topological changes along the pathways provide a clear explanation for the geometrical changes that occur along the reaction pathway. In summary, the detachment of the N2 molecule is found to be kinetically an effective process for both reactions, owing to the high exothermicity and consequently to the high internal energy of the insertion intermediates. However, in the case of Mo atom, the reaction should be a slow process due to the presence of spin-forbidden transitions. These results fully agree with previous experimental works.
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Inorg Chem
December 2024
Aix Marseille Univ, CNRS, BIP UMR7281, IMM, IM2B, Marseille 13009, France.
Mono-pyranopterin-containing sulfite-oxidizing enzymes (SOEs), including eukaryotic sulfite oxidases and homologous prokaryotic sulfite dehydrogenases (SDHs), are molybdenum enzymes that exist in almost all forms of life, where they catalyze the direct oxidation of sulfite into sulfate, playing a key role in protecting cells and organisms against sulfite-induced damage. To decipher their catalytic mechanism, we have previously provided structural and spectroscopic evidence for direct coordination of HPO to the Mo atom at the active site of the SDH from the hyperthermophilic bacterium (SDH), mimicking the proposed sulfate-bound intermediate proposed to be formed during catalysis. In this work, by solving the X-ray crystallographic structure of the unbound enzyme, we resolve the changes in the hydrogen bonding network in the molybdenum environment that enable the stabilization of the previously characterized phosphate adduct.
View Article and Find Full Text PDFComput Struct Biotechnol J
December 2024
NovaMechanics MIKE, Piraeus 18545, Greece.
NanoTube Construct is a web tool for the digital construction of nanotubes based on real and hypothetical single-layer materials including carbon-based materials such as graphene, graphane, graphyne polymorphs, graphidiyene and non-carbon materials such as silicene, germanene, boron nitride, hexagonal bilayer silica, haeckelite silica, molybdene disulfide and tungsten disulfide. Contrary to other available tools, NanoTube Construct has the following features: a) it is not limited to zero thickness materials with specific symmetry, b) it applies energy minimisation to the geometrically constructed Nanotubes to generate realistic ones, c) it derives atomistic descriptors (e.g.
View Article and Find Full Text PDFACS Sens
December 2024
College of Mechanics and Safety Engineering, Zhengzhou University, Zhengzhou, Henan 450001, China.
Ensuring water-fouling-free operation of semiconductor-based gas sensors is essential to maintaining their accuracy, reliability, and stability across diverse applications. Despite the use of hydrophobic strategies to prevent external water intrusion, addressing in situ-produced water transport during H detection remains a challenge. Herein, we construct a novel waterproof H sensor by integrating single-atom Ru self-assembly with monolayer amphiphiles embedded in MoS.
View Article and Find Full Text PDFDalton Trans
December 2024
Institut für Anorganische Chemie, der Rheinischen Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany.
Combining different heteroatoms in an epoxide-type ring having Lewis basic and acidic characteristics is challenging as it creates an increasing number of polar bonds and high ring strain energy. The first examples of isolable oxaphosphiranes, , epoxide rings with a phosphorus atom, have been synthesized using a facile and effective protocol starting from [pentacarbonyl{dichloro(trityl)phosphane}molybdenum(0)] (trityl = CPh), -butyllithium and commercially available fluorinated benzaldehydes. Reactions with various acids and bases will be described.
View Article and Find Full Text PDFACS Appl Mater Interfaces
November 2024
Faculty of Science and Engineering, Aoyama Gakuin University, 5-10-1 Fuchinobe, Sagamihara, Kanagawa 252-5258, Japan.
Atom-vacancy-defects present in various materials yield numerous interesting physical phenomena, even obstructing high performance in some cases. On the other hand, their valuable applications to novel devices, such as nitrogen vacancy centers in diamond for quantum bits, have gathered significant attention. In particular, these tendencies become more substantial in two-dimensional (2D) (atomically) thin van der Waals layers.
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