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Specimens of Contracaecum rudolphii sensu lato (s.l.) (Nematoda: Anisakidae) from Phalacrocorax carbo sinensis from northeastern and central Italy were characterised genetically and compared with those from Phalacrocorax aristotelis from Galician coasts, Spain (identified as C. rudolphii A by multilocus enzyme electrophoresis) and with specimens of C. septentrionale from Alca torda from the Galician coasts, Spain. The first (ITS-1) and second (ITS-2) internal transcribed spacers (ITS) of ribosomal DNA (rDNA) were amplified by polymerase chain reaction (PCR) from individual nematodes and the amplicons subjected to single-strand conformation polymorphism (SSCP) analysis and/or sequencing. For each ITS region, C. septentrionale specimens were distinct from those of C. rudolphii (s.l.) and C. rudolphii A based on SSCP profiles and ITS sequences. Some specimens of C. rudolphii (s.l.) had the same SSCP profiles and ITS sequences as C. rudolphii A, whereas the others had distinct SSCP profiles and ITS sequences and were suggested to represent C. rudolphii B based on host and geographical origins and genetic similarity to C. rudolphii A. While no length or nucleotide variation in the ITS-1 and ITS-2 sequences was detected within each taxon, nucleotide differences of 1.8-5.5% (ITS-1) and 5.1-12.2% (ITS-2) were detected among them. The results support the hypothesis that C. rudolphii represents a complex of at least two sibling species and provide support for the validity of C. septentrionale as a separate species. The definition of genetic markers in the ITS rDNA provides opportunities for investigating the life cycles, transmission patterns and ecology of the anisakid nematodes studied herein.
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http://dx.doi.org/10.1007/s00436-005-1366-y | DOI Listing |
Materials (Basel)
November 2024
School of Mechanical Engineering and Mechanics, Xiangtan University, Xiangtan 411105, China.
Stainless steel core plates (SSCPs) show great potential for modular construction due to their superiority of excellent mechanical properties, light weight, and low cost over traditional concrete and honeycomb structures. During the brazing process of SSCP joints which connect the skin panel and core tubes, it is difficult to keep an even heat flow of inert gas in the vast furnace, which can lead to partially missing solder defects in brazing joints. Pulsed eddy current imaging (PECI) has demonstrated feasibility for detecting missing solder defects, but various factors including lift-off variation and image blurring can deteriorate the quality of C-scan images, resulting in inaccurate evaluation of the actual state of the brazed joints.
View Article and Find Full Text PDFFront Biosci (Landmark Ed)
August 2024
Division of Korean Medicine (KM) Science Research, Korea Institute of Oriental Medicine, 34054 Daejeon, Republic of Korea.
Bacterial Artificial chromosome (BAC) recombineering is a powerful genetic manipulation tool for the efficient development of recombinant genetic resources. Long homology arms of more than 150 kb composed of BAC constructs not only substantially enhance genetic recombination events, but also provide a variety of single nucleotide polymorphisms (SNPs) that are useful markers for accurately docking BAC constructs at target sites. Even if the BAC construct is homologous to the sequences of the target region, different variations may be distributed between various SNPs within the region and those within the BAC construct.
View Article and Find Full Text PDFGene
April 2024
Genome Biology Lab, Department of Biosciences, Jamia Millia Islamia, New Delhi 110025, India. Electronic address:
FBXW7, belonging to the F-Box protein family, is considered a candidate cancer susceptibility gene. Our findings indicate that single nucleotide polymorphisms (SNPs) in the FBXW7 gene are linked to cancer risk, strengthening FBXW7's role in the pathogenesis of colorectal cancer. Our case-control study comprised of 450 patients diagnosed with colorectal cancer (CRC) and an equal number of 450 healthy subjects.
View Article and Find Full Text PDFVet Sci
April 2023
Balikesir Directorate of Provincial Agriculture and Forestry, Republic of Turkey Ministry of Agriculture and Forestry, Balikesir 10470, Turkey.
This investigation was conducted to determine how the growth and carcass traits of meat-type sheep breeds raised in Turkey are associated with 5'UTR polymorphisms. Overall, 202 lambs from five breeds were evaluated. We identified eight nucleotide changes (seven substitutions and one deletion) in three variants of 5'UTR by SSCP analysis and nucleotide sequencing.
View Article and Find Full Text PDFSci Rep
November 2022
Biology Department, Science and Humanities College, Shaqra University, Al-Quwayiyah, 11726, Riyadh, Saudi Arabia.
Polychlorinated Biphenyls (PCBs) are persistence in the contaminated sites as a result of lacking PCBs-degrading microorganisms. Cultivation-independent technique called single-strand-conformation polymorphism (SSCP) based on 16SrRNA genes was chosen to characterize the diversity of bacterial communities in PCBs polluted soil samples. The bacterial communities showed an increasing diversity from the genetic profiles using SSCP technique.
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