The Caenorhabditis elegans pos-1 gene encodes a zinc-finger protein that is required for germline specification during embryogenesis. The maternally provided mRNA is translationally regulated both spatially and temporally during early development. We have cloned orthologs of pos-1 from C. briggsae and C. remanei, two Caenorhabditis species that have diverged from C. elegans by approximately 20-40 million years. Two regions in the 3' untranslated region are highly conserved among all three species. We find that the pos-1 RNA is expressed in the hermaphrodite and female gonads of C. briggsae and C. remanei but POS-1 protein is not detected at high levels in C. briggsae until the 2-cell stage of embryogenesis. The protein expression is restricted to the germline precursors of the embryo. We conclude that pos-1 appears to be translationally regulated in C. briggsae as it is in C. elegans and speculate the conserved 3' UTR sequences may be involved.
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bioRxiv
October 2024
Department of Ecology, Behavior, and Evolution, School of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Intrinsic reproductive isolation occurs when genetic differences between populations disrupt the development of hybrid organisms, preventing gene flow and enforcing speciation. While prior studies have examined the genetic origins of hybrid incompatibility, the effects of incompatible factors on development remain poorly understood. Here, we investigate the mechanistic basis of hybrid incompatibility in nematodes by capitalizing on the ability of females to produce embryos after mating with males from several other species.
View Article and Find Full Text PDFJ Vis Exp
August 2024
Division of Biology and Biological Engineering, California Institute of Technology;
Chemical communication is vital in organismal health, reproduction, and overall well-being. Understanding the molecular pathways, neural processes, and computations governing these signals remains an active area of research. The nematode Caenorhabditis elegans provides a powerful model for studying these processes as it produces a volatile sex pheromone.
View Article and Find Full Text PDFMicroPubl Biol
July 2024
Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
WormBase and the Alliance of Genome Resources provide several types of gene data including annotations to ontology terms and controlled vocabularies. These are used to automatically generate text summaries to give users a cogent view of gene function. However, automated summaries are not available for genes that lack curated annotations.
View Article and Find Full Text PDFAging Cell
November 2024
Animal Ecology, Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden.
Germline regulates the expression of life-history traits and mediates the trade-off between reproduction and somatic maintenance. However, germline maintenance in itself can be costly, and the costs can vary between the sexes depending on the number of gametes produced across the lifetime. We tested this directly by germline ablation using glp-1 RNA interference (RNAi) in a dioecious nematode Caenorhabditis remanei.
View Article and Find Full Text PDFMicroPubl Biol
May 2024
Department of Physiology and Biophysics, University of Washington, Seattle, Washington, United States.
The RNA-seq Browser is an open-source Shiny web app that enables on-demand visualization and quantification of bulk RNA-sequencing data for five species: , , , , and . The app is designed to allow researchers without previous coding experience to interactively explore publicly available RNA-sequencing data. Key app features include the ability to plot gene expression across life stages for user-specified gene sets, and modules for performing differential gene expression analyses.
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