Five salts of 1,2,4,5-benzenetetracarboxylic acid (pyromellitic acid), [C6H2(COO)4H4], have been synthesized and investigated by infrared and Raman spectroscopy and by single crystal X-ray diffraction methods: sodium salt [Na2(H2O)2][C6H2(COO)4H2], potassium salt [K(H2O)3][C6H2(COO)4H3] and transition metal salts [M(H2O)6][C6H2(COO)4H2], which M = Mn, Ni and Zn. Crystal structures of all five compounds show short intramolecular asymmetric hydrogen bonds (SHB) between adjacent carboxyl groups with O...O distance average of 2.40 A. The Raman and infrared spectra reported indicate the presence of short hydrogen bonds in all salts, in agreement with the X-ray data. The O-H stretching mode [nu(OH)] had been observed at about 2500 cm(-1). Deuterated analogues were synthesized and their Raman spectra show that nu(OH)/nu(OD) ratio average is about unit. The symmetric [nu(sym)(O..H..O)] and asymmetric [nu(asym)(O..H..O)] stretching modes have been attributed about 300 and 870 cm(-1), respectively, in all salts, and for deuterated analogues, the ratio nu(OH)/nu(OD) to nu(sym)(O..H..O, O..D..O) is close to unit like it occurs in nu(OH). The vibrational modes, mainly SHB modes, are tentatively assigned by molecular orbital ab initio calculations of pyromellitic acid and anions [C6H2(COO)4H3]- and [C6H2(COO)4H2]2-. Geometry optimizations showed a good agreement with experimental data. Frequency calculation confirms the assignment of specific vibrational modes. Ab initio calculations show that nu(C=O) and nu(sym)(COO) are strongly coupled with in plane OH bending [delta(OH)]. In Raman spectra of deuterated analogues is observed a frequency shift of these bands.
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http://dx.doi.org/10.1016/j.saa.2004.07.005 | DOI Listing |
Anal Chim Acta
February 2025
Institute of Physical and Analytical Chemistry, School of Exact and Natural Sciences, Tbilisi State University, 0179, Tbilisi, Georgia. Electronic address:
Background: Isotopologues resulting from the labelling of molecules with deuterium have attracted interest due to the isotope effect observed in chemistry and biosciences. Isotope effect may also play out in noncovalent interactions and mechanisms leading to intermolecular recognition. In chromatography, differences in retention time between isotopologues, as well as between isotopomers have been observed resulting in two different elution sequences (isotope effects): the normal isotope effect when heavier isotopologues retain longer than lighter analogues, and the inverse isotope effect featuring the opposite elution order.
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December 2024
Grup de Química Farmacèutica, IQS School of Engineering, Universitat Ramon Llull, Via Augusta 390, E-08017 Barcelona, Spain.
In cases in which a rapid metabolism is the cause of an unfavorable pharmacokinetic profile, it is important to determine the Sites of Metabolism (SoMs) of a molecule to introduce the necessary modifications to improve the stability of the compound. The substitution of hydrogen atoms by deuterium atoms has been proposed to ameliorate such properties due to the greater stability of the C-D bonds. , bearing a 2-phenylamino substituent, is a compound previously described by our group with good biological activity as a discoidin domain receptor (DDR2) inhibitor but suffers from low metabolic stability determined in a test with rat-liver microsomes (less than 50% of the initial compound after 60 min).
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December 2024
Istituto di Chimica Biomolecolare, Consiglio Nazionale delle Ricerche, Traversa La Crucca 3, I-07100 Sassari, Italy.
In this study, UV-induced ()-to-() geometrical isomerizations of the curcumin degradation product ()-dehydrozingerone, along with curcumin-inspired ()--methylated dehydrozingerone and their corresponding C-symmetric dimers, were investigated. All compounds produced corresponding () isomers in varying yields upon UV irradiation in deuterated solvents. The efficiency of these photoisomerizations depended on the solvent and wavelength used.
View Article and Find Full Text PDFInt J Mol Sci
December 2024
Institute of Physics, Kazan Federal University, 18 Kremlevskaya St., Kazan 420008, Russia.
The spectral characteristics of cyclosporin C (CsC) with the addition of Dy ions in acetonitrile (CDCN) and CsC with Dy incorporated into dodecylphosphocholine (DPC) micelle in deuterated water were investigated by high-resolution NMR spectroscopy. The study was focused on the interaction between Dy ions and CsC molecules in different environments. Using a combination of one-dimensional and two-dimensional NMR techniques, we obtained information on the spatial features of the peptide molecule and the interaction between CsC and the metal ion.
View Article and Find Full Text PDFChemistry
December 2024
Department of Chemistry, University of Liverpool, Liverpool, L69 7ZD, UK.
The Zincke reaction and Birch reduction have been one of the few reactions that allow for ring opening of pyridines ever since the discovery of pyridine more than a century ago. This paper presents a new addition to the list of pyridine ring-opening reactions, reductive Zincke reaction, which affords saturated δ-amino ketones. Under the catalysis of a simple rhodium complex, pyridinium salts with diverse substituents are reduced with formic acid, ring-opened with water, transaminated with a secondary amine and further reduced to afford a wide range of δ-amino ketones, including those in which the alkane chain of the ketones is selectively deuterated or fluorinated.
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