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Template DNA ratio can affect detection by genus-specific PCR-denaturing gradient gel electrophoresis of bacteria present at low abundance in mixed populations. | LitMetric

AI Article Synopsis

  • The study compares two methods for detecting Helicobacter species in mouse intestine samples: genus-specific PCR-DGGE and species-specific PCR.
  • Findings indicate that genus-specific PCR-DGGE might not identify all Helicobacter species present in samples with multiple species.
  • The effectiveness of genus-specific PCR-DGGE is influenced by the initial ratio of template DNA in the samples.

Article Abstract

The detection of Helicobacter species by genus-specific polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) was compared with that by species-specific PCR in murine intestinal samples. Results suggest that, in samples containing multiple Helicobacter species, genus-specific PCR-DGGE may fail to detect all Helicobacter species present and that this relates to the initial template DNA ratio.

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Source
http://dx.doi.org/10.1111/j.1523-5378.2005.00294.xDOI Listing

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