Various inositide phosphatases participate in the regulation of inositol polyphosphate signaling molecules. Plant phytases are phosphatases that hydrolyze phytate to less-phosphorylated myo-inositol derivatives and phosphate. The phytase from Selenomonas ruminantium shares no sequence homology with other microbial phytases. Its crystal structure revealed a phytase fold of the dual-specificity phosphatase type. The active site is located near a conserved cysteine-containing (Cys241) P loop. We also solved two other crystal forms in which an inhibitor, myo-inositol hexasulfate, is cocrystallized with the enzyme. In the "standby" and the "inhibited" crystal forms, the inhibitor is bound, respectively, in a pocket slightly away from Cys241 and at the substrate binding site where the phosphate group to be hydrolyzed is held close to the -SH group of Cys241. Our structural and mutagenesis studies allow us to visualize the way in which the P loop-containing phytase attracts and hydrolyzes the substrate (phytate) sequentially.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.str.2004.08.010DOI Listing

Publication Analysis

Top Keywords

selenomonas ruminantium
8
phytase fold
8
crystal forms
8
forms inhibitor
8
phytase
5
structures selenomonas
4
ruminantium phytase
4
phytase complex
4
complex persulfated
4
persulfated phytate
4

Similar Publications

Macroalgae Compound Characterizations and Their Effect on the Ruminal Microbiome in Supplemented Lambs.

Vet Sci

December 2024

Facultad de Agronomía y Veterinaria, Centro de Biociencias, Instituto de Investigaciones en Zonas Desérticas, Universidad Autónoma de San Luis Potosí, San Luis Potosí 78321, Mexico.

The impact of macroalgae species on rumen function remains largely unexplored. This present study aimed to identify the biocompounds of the three types of marine macroalgae described: (Brown), spp. (Lettuce), spp.

View Article and Find Full Text PDF

Anaerobic plasmalogen production in recombinant Escherichia coli carrying plasmalogen synthase gene from Selenomonas ruminantium.

Biosci Biotechnol Biochem

December 2024

Department of Agricultural Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, Japan.

Escherichia coli expressing SrPlsAR from Selenomonas ruminantium produces plasmalogen, comprising almost 60% of the total phospholipid content under anaerobic conditions. Both plasmenylethanolamine and plasmenylglycerol were detected, and the major acyl aldehyde derived from sn-1 vinyl ether was C16:1. Plasmalogen synthesis is affected by mutations in ATP-binding sites and Cys expected to be involved in the formation of the [4Fe-4S] cluster.

View Article and Find Full Text PDF

Comparative analysis of oral saliva microbiomes and metabolites in Han population at different altitudes.

Front Microbiol

November 2024

Key laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.

Objective: This study investigated the differences in oral saliva microbiota composition and metabolic products among Han Chinese populations living at different altitudes, as well as their correlations.

Method: The analysis was conducted using the 16S rRNA gene sequencing method and untargeted metabolomics.

Results: 16S gene sequencing results showed significant differences in bacterial diversity and composition between HH (High altitude Han) group and LH (Low altitude Han) group.

View Article and Find Full Text PDF
Article Synopsis
  • The study aimed to assess how myelosuppressive chemotherapy affects the oral microbiome and its correlation with oral mucositis (OM) and febrile neutropenia (FN) in cancer patients.
  • Researchers conducted a longitudinal analysis involving 46 patients, collecting oral rinsing samples at various stages of treatment, which were analyzed for changes in microbial diversity.
  • Significant alterations in the oral microbiome were found during chemotherapy and in the presence of OM, indicating a potential link between treatment and oral health complications, though more extensive studies are needed for confirmation.
View Article and Find Full Text PDF

Dietary tannins can affect rumen microbiota and enteric fermentation to mitigate methane emissions, although such effects have not yet been fully elucidated. We tested two subunits of hydrolyzable tannins named gallic acid (GA) and ellagic acid (EA), alone (75 mg/g DM each) or combined (150 mg/g DM in total), using the Rusitec system. EA and EA+GA treatments decreased methane production, volatile fatty acids, nutrient degradation, relative abundance of , , but increased .

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!