Multiple phosphorothioate oligonucleotides containing a 3'-terminal negative charge were synthesized and characterized. Influence of the added negative charge on activation of duplexes by RNase H was investigated. No additional help in recruitment of RNase H was observed.
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http://dx.doi.org/10.1081/ncn-120027824 | DOI Listing |
Int J Mol Sci
December 2024
Research Unit on Computational Biology and Drug Design, Children's Hospital of Mexico Federico Gómez, Mexico City 06720, Mexico.
Cell-penetrating peptides (CPPs) are a diverse group of peptides, typically composed of 4 to 40 amino acids, known for their unique ability to transport a wide range of substances-such as small molecules, plasmid DNA, small interfering RNA, proteins, viruses, and nanoparticles-across cellular membranes while preserving the integrity of the cargo. CPPs exhibit passive and non-selective behavior, often requiring functionalization or chemical modification to enhance their specificity and efficacy. The precise mechanisms governing the cellular uptake of CPPs remain ambiguous; however, electrostatic interactions between positively charged amino acids and negatively charged glycosaminoglycans on the membrane, particularly heparan sulfate proteoglycans, are considered the initial crucial step for CPP uptake.
View Article and Find Full Text PDFInt J Mol Sci
December 2024
Medicines Discovery Institute, Cardiff University, Cardiff CF10 3AT, UK.
DNA gyrase is a bacterial type IIA topoisomerase that can create temporary double-stranded DNA breaks to regulate DNA topology and an archetypical target of antibiotics. The widely used quinolone class of drugs use a water-metal ion bridge in interacting with the GyrA subunit of DNA gyrase. Zoliflodacin sits in the same pocket as quinolones but interacts with the GyrB subunit and also stabilizes lethal double-stranded DNA breaks.
View Article and Find Full Text PDFEnviron Res
January 2025
Department of Chemical Engineering, BITS Pilani Hyderabad Campus, Hyderabad-500078, India.
In this work, a novel adsorbent from alginate, zeolite and biochar has been made through one-pot synthesis route with highly compatible Sodium Dodecyl Sulphate (SDS) modification. This gave ultra-high Ni removal of 1205 mg/g in batch mode while treating almost 200 L of solution in column mode with 1171 mg/g capacity, which are the one of the highest reported values. The Point of Zero Charge (pH) for Ni removal was determined to be 5, with optimal removal efficiency being observed at pH 7, indicating a negative surface charge of the ABPC beads, which aligns with the anionic charge provided by SDS enhancement.
View Article and Find Full Text PDFInt J Biol Macromol
January 2025
Research Center of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia.
The search for new hemostatic materials remains a priority for researchers, as the problem of uncontrolled hemorrhage during surgical interventions or traumatic injuries represents a significant challenge. The objective of the study was to identify novel polysaccharide structures with enhanced hemostatic properties based on chitosan. The number of chitosan derivatives with two substituents was synthesized and characterized by H NMR, FTIR.
View Article and Find Full Text PDFLangmuir
January 2025
R&D - Analytical Science Research, Kao Corporation, 1334 minato, Wakayama, Wakayama 640-8580, Japan.
The adsorption behavior of an anionic surfactant, hydroxy alkane sulfonate with an alkyl chain length of 18 (C18HAS), from its hard water solution onto a mica surface and resulting lubrication properties were investigated. Because of the double chain-like chemical structure and aggregation behavior, C18HAS formed vesicles in hard water, which adsorbed onto a negatively charged mica surface via cation (Ca) bridging and then transformed into a bilayer film. The number of bilayers formed on the surface was evaluated by force curve measurements using an atomic force microscope (AFM), and the results showed a time-dependent increase of the number of adsorbed bilayers.
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