A parameter, chi2p, based on the fitting error was introduced as a measure of reliability of DT-MRI data, and its properties were investigated in simulations and human brain data. Its comparison with the classic chi2 revealed its sensitivity to both the goodness of fit and the pixel signal-to-noise-ratio (SNR), unlike the classic chi2, which is sensitive only to the goodness of fit. The new parameter was thus able to separate effectively pixels with coherent signals (having small fitting error and/or high SNR) from those with random signals (having inconsistent fitting and/or low SNR). A practical advantage of chi2p over the classic chi2 was that chi2p is quantified directly from the data of each pixel, without requiring accurate estimation of data-dependent parameters (such as noise variance), which often makes application of the classic chi2 problematic. Analytical approximations of chi2p enabled an objective (data-independent) and automated calculation of a threshold value, used for internal scaling of the chi2p map. Apart from assessing data reliability on a pixel-by-pixel basis, chi2p was used to develop an objective and generic methodology for the exclusion of pixels with unreliable DT information by discarding pixels with chi2p values exceeding the threshold. Pixels corresponding to very low SNR, and poorly fitted cerebrospinal fluid and surrounding brain tissue, had increased chi2p values and were successfully excluded, providing DT anisotropy maps free from artifactual anisotropic appearance.
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http://dx.doi.org/10.1016/s1090-7807(03)00202-7 | DOI Listing |
BMC Microbiol
January 2025
Department of Respiratory Medicine, Capital Medical University, Beijing, China.
Background: The clinical outcomes and microbiological features of lower respiratory tract infections (LRTIs) caused by hypervirulent Klebsiella pneumoniae (hvKp) and classical Klebsiella pneumoniae (cKp) have not been well understood.
Methods: This study collected 287 non-repetitive Klebsiella pneumoniae isolates from 287 LRTI patients. All these strains underwent annotation for resistance and virulence factors, with 141 strains undergoing mouse infection experiments to assess their virulence.
BMC Plant Biol
November 2024
Instituto de Agricultura Sostenible (IAS-CSIC), Alameda del Obispo s/n, Córdoba, 14004, Spain.
Int J Mol Sci
November 2024
Department of Biochemistry and Molecular Biology I, Faculty of Science, University of Granada, 18071 Granada, Spain.
Light Sci Appl
October 2024
Holonyak Micro and Nanotechnology Laboratory and Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Nonlinear optics plays an important role in many areas of science and technology. The advance of nonlinear optics is empowered by the discovery and utilization of materials with growing optical nonlinearity. Here we demonstrate an indium gallium phosphide (InGaP) integrated photonics platform for broadband, ultra-efficient second-order nonlinear optics.
View Article and Find Full Text PDFNonlinear photonic crystals with a helical structure in the second-order nonlinear coefficient (χ) are fabricated using infrared femtosecond laser poling in ferroelectric SrBaNbO crystals. The quasi-orbital angular momentum of the helical χ structure can be imprinted on the interacting photons during nonlinear optical processes, allowing the topological charge of the generated photons at new frequencies to be controlled. Here we study the case of a double-helix nonlinear photonic structure for the generation of a second-harmonic vortex beam from a Gaussian pump beam without phase singularity.
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