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Implementing the discontinuous-Galerkin finite element method using graph neural networks with application to diffusion equations.
Neural Netw
December 2024
Department of Earth Science and Engineering, Imperial College London, Prince Consort Road, London SW7 2BP, UK; Centre for AI-Physics Modelling, Imperial-X, White City Campus, Imperial College London, W12 7SL, UK.
Machine learning (ML) has benefited from both software and hardware advancements, leading to increasing interest in capitalising on ML throughout academia and industry. There have been efforts in the scientific computing community to leverage this development via implementing conventional partial differential equation (PDE) solvers with machine learning packages, most of which rely on structured spatial discretisation and fast convolution algorithms. However, unstructured meshes are favoured in problems with complex geometries.
View Article and Find Full Text PDFTemporal dynamics of airborne fungi in Swedish forest nurseries.
Appl Environ Microbiol
January 2025
Department of Forest Mycology and Plant Pathology, Uppsala BioCenter, Swedish University of Agricultural Sciences, Uppsala, Sweden.
In Sweden, reforestation of managed forests relies predominantly on planting nursery-produced tree seedlings. However, the intense production using containerized cultivation systems (e.g.
View Article and Find Full Text PDFCrispant analysis in zebrafish as a tool for rapid functional screening of disease-causing genes for bone fragility.
Elife
January 2025
Center for Medical Genetics Ghent, Department of Biomolecular Medicine, Ghent University, Ghent, Belgium.
Heritable fragile bone disorders (FBDs), ranging from multifactorial to rare monogenic conditions, are characterized by an elevated fracture risk. Validating causative genes and understanding their mechanisms remain challenging. We assessed a semi-high throughput zebrafish screening platform for rapid in vivo functional testing of candidate FBD genes.
View Article and Find Full Text PDFManipulation of mitochondrial poly(A) polymerase family proteins in impacts mRNA termini processing.
Front Parasitol
January 2024
Department of Biomedical Sciences, University of Minnesota Medical School, Duluth, MN, United States.
RNA-specific nucleotidyltransferases (rNTrs) add nontemplated nucleotides to the 3 end of RNA. Two noncanonical rNTRs that are thought to be poly(A) polymerases (PAPs) have been identified in the mitochondria of trypanosomes - KPAP1 and KPAP2. KPAP1 is the primary polymerase that adds adenines (As) to trypanosome mitochondrial mRNA 3 tails, while KPAP2 is a non-essential putative polymerase whose role in the mitochondria is ambiguous.
View Article and Find Full Text PDFInteraction of light with gas-liquid interfaces: influence on photon absorption in continuous-flow photoreactors.
React Chem Eng
January 2025
Flow Chemistry Group, van't Hoff Institute for Molecular Sciences (HIMS), Universiteit van Amsterdam (UvA) 1098 XH Amsterdam The Netherlands
Light interacts with gas bubbles in various ways, potentially leading to photon losses in gas-liquid photochemical applications. Given that light is a valuable 'reagent', understanding these losses is crucial for optimizing reactor efficiency. In this study, we address the challenge of quantifying these interactions by implementing a method that separately determines the photon flux and utilizes actinometric experiments to determine the effective optical path length, a key descriptor of photon absorption.
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