Isomerization of aspartate to isoaspartate occurs spontaneously in proteins, causes changes in protein structures, and correlates positively with the aging processes of many organisms, including Alzheimer disease in humans. Aspartate isomerization proceeds through an unstable cyclic succinimide intermediate. There are few protein structure determinations that have characterized the intermediates and products of this isomerization reaction. Here we report the discovery of an unusually stabilized succinimide ring in the 1.1A structure of the Escherichia coli CheY protein, as determined from a crystal eight years old. The ring is formed by the side-chain of aspartate 75 and the backbone nitrogen of glycine 76 in an exposed loop of the molecule. Stabilization of the succinimide is through interaction of a sulfate ion oxygen atom with the imide nitrogen atom. Formation of the ring caused conformational changes in the loop, but did not alter the overall structure of the protein.
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http://dx.doi.org/10.1016/s0022-2836(02)00821-5 | DOI Listing |
Commun Chem
December 2024
Laboratory of Structural Chemistry and Biology, Institute of Chemistry, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/A, 1117, Budapest, Hungary.
Under physiological conditions in peptides or proteins, the -AsnGly- motif autonomously rearranges within hours/days to β-Asp and α-Asp containing sequence, via succinimide intermedier. The formation of the succinimide is the rate-limiting step, with a strong pH and temperature dependence. We found that Arg(+) at the (n + 2) position (relative to Asn in the n position) favors isomerisation by forming a transition-state like structure, whereas Glu(-) disfavors isomerisation by adopting a β-turn like conformer.
View Article and Find Full Text PDFParasitol Int
February 2025
Department of Parasitology, Institute of Tropical Medicine (NEKKEN), The Joint Usage/Research Center on Tropical Disease, Nagasaki University, Nagasaki, Japan.
Schistosomiasis is a parasitic disease affecting more than 250 million people worldwide. Schistosomes infect humans by cercariae penetrating the skin in a freshwater environment. Findings obtained more than 100 years prior showed that miracidium develops into cercaria in freshwater snails, though detailed development dynamics have not been elucidated.
View Article and Find Full Text PDFMol Pharm
November 2024
The Key Laboratory of Functional Molecular Solids, Ministry of Education; Anhui Province Key Laboratory of Biomedical Materials and Chemical Measurement; College of Chemistry and Materials Science, Anhui Normal University, Wuhu, 241002, P. R. China.
The accurate and efficient quantification of nanodrug dosage is crucial for early anticancer therapy. The enzyme-linked immunosorbent assay (ELISA) has emerged as a robust tool for detecting anticancer nanodrug dosage; however, the development of sensing elements to quantify anticancer nanodrugs still poses a challenge. To overcome this problem, we utilize polysuccinimide-loaded curcumin (CUR @PSI) as a model to employ an ELISA based on peroxidase nanozyme Pt-SiO Janus nanoparticles (Pt-SiO JNPs) for the indirect quantitative analysis of intracellular anticancer nanodrug dosage.
View Article and Find Full Text PDFJACS Au
August 2024
AMOLF, Ultrafast Spectroscopy, Science Park 104, 1098 XG Amsterdam, The Netherlands.
Aqueous proton transfer reactions are fundamental in biology and chemistry, yet kinetics and mechanisms of strong base-weak acid reactions are not well understood. In this work, we present a temperature-dependent reaction kinetic study of the water-soluble photobase actinoquinol, in the presence and absence of succinimide, a weak acid reaction partner. We study the temperature dependence of the reaction and connect the observed dynamics to the reaction's thermodynamics.
View Article and Find Full Text PDFAntibodies (Basel)
June 2024
Analytical Sciences, Eli Lilly and the Company, Branchburg, NJ 08876, USA.
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