AI Article Synopsis

  • - Cel6A, an enzyme from Trichoderma reesei, functions as an inverting glycosidase with a unique tunnel-shaped active site containing two key aspartic acids, D221 and D175, that are crucial for its catalytic activity.
  • - Research methods like site-directed mutagenesis, X-ray crystallography, and enzyme kinetics showed that D221 acts as the catalytic acid while D175 helps stabilize the transition state.
  • - The study suggests that Cel6A's mechanism might not involve a traditional catalytic base, indicating a complex interaction between the enzyme's amino acids and water molecules during the hydrolysis of cellotriose.

Article Abstract

Trichoderma reesei cellobiohydrolase Cel6A is an inverting glycosidase. Structural studies have established that the tunnel-shaped active site of Cel6A contains two aspartic acids, D221 and D175, that are close to the glycosidic oxygen of the scissile bond and at hydrogen-bonding distance from each other. Here, site-directed mutagenesis, X-ray crystallography, and enzyme kinetic studies have been used to confirm the role of residue D221 as the catalytic acid. D175 is shown to affect protonation of D221 and to contribute to the electrostatic stabilization of the partial positive charge in the transition state. Structural and modeling studies suggest that the single-displacement mechanism of Cel6A may not directly involve a catalytic base. The value of (D2O)(V) of 1.16 +/- 0.14 for hydrolysis of cellotriose suggests that the large direct effect expected for proton transfer from the nucleophilic water through a water chain (Grotthus mechanism) is offset by an inverse effect arising from reversibly breaking the short, tight hydrogen bond between D221 and D175 before catalysis.

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http://dx.doi.org/10.1021/ja012659qDOI Listing

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Two carboxylic acid side chains can, depending on their geometry and environment, share a proton in a hydrogen bond and form a carboxyl-carboxylate pair. In the Trichoderma reesei cellobiohydrolase Cel6A structure, five carboxyl-carboxylate pairs are observed. One of these pairs (D175-D221) is involved in catalysis, and three other pairs are found in, or close to the two surface loops covering the active site tunnel of the catalytic domain.

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Article Synopsis
  • - Cel6A, an enzyme from Trichoderma reesei, functions as an inverting glycosidase with a unique tunnel-shaped active site containing two key aspartic acids, D221 and D175, that are crucial for its catalytic activity.
  • - Research methods like site-directed mutagenesis, X-ray crystallography, and enzyme kinetics showed that D221 acts as the catalytic acid while D175 helps stabilize the transition state.
  • - The study suggests that Cel6A's mechanism might not involve a traditional catalytic base, indicating a complex interaction between the enzyme's amino acids and water molecules during the hydrolysis of cellotriose.
View Article and Find Full Text PDF

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