A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Kinetic studies of a recombinant cellobiose phosphorylase (CBP) of the Clostridium thermocellum YM4 strain expressed in Escherichia coli. | LitMetric

AI Article Synopsis

  • A cellobiose phosphorylase (CBP) from Clostridium thermocellum was purified and studied for its reaction mechanisms, showing an ordered bi bi mechanism where P(i) binds first.
  • The enzyme demonstrated a preference for beta-D-glucose over alpha-D-glucose, highlighting the importance of the beta-anomeric configuration for its activity, although some activity remains without it.
  • Substrate specificity tests showed that the configurations of the C3 and C4 hydroxyl groups are essential for enzyme function, while variations in C2 and C6 positions are permissible; D-glucose was found to inhibit the enzyme by competing with another substrate, G 1-P.

Article Abstract

A cellobiose phosphorylase (CBP) cloned from the Clostridium thermocellum YM4 strain was purified to homogeneity, and the reaction mechanisms of both the phosphorolytic and synthetic reactions were studied in detail. The enzyme reaction proceeded via an ordered bi bi mechanism, in which P(i) bound to the enzyme prior to D-cellobiose and then G 1-P was released after D-glucose. The order of substrate binding was different from that of CBP from Cellvibrio gilvus, which bound to cellobiose prior to P(i). In the synthetic reaction, the enzyme showed three times higher activity with beta-D-glucose than with alpha-D-glucose, and also showed weak activity with 1,5-anhydro-D-glucitol, indicating that the beta-anomeric hydroxyl group of D-glucose is highly required. However, even when it is removed enzyme activity remains. The substrate specificity and kinetic studies revealed that the configurations of the C3 and C4 hydroxyl groups were strictly required for the enzyme activity, whereas those of C2 and C6 could be substituted or deleted. The mechanism of substrate inhibition by D-glucose was studied in detail and it was concluded that D-glucose competed with G 1-P for its binding site in the synthetic reaction.

Download full-text PDF

Source
http://dx.doi.org/10.1093/oxfordjournals.jbchem.a003210DOI Listing

Publication Analysis

Top Keywords

kinetic studies
8
cellobiose phosphorylase
8
phosphorylase cbp
8
clostridium thermocellum
8
thermocellum ym4
8
ym4 strain
8
studied detail
8
synthetic reaction
8
enzyme activity
8
enzyme
5

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!