A new principle in constructing molecular complexes from the known high-resolution domain structures joining data from NMR and small-angle x-ray scattering (SAXS) measurements is described. Structure of calmodulin in complex with trifluoperazine was built from N- and C-terminal domains oriented based on residual dipolar couplings measured by NMR in a dilute liquid crystal, and the overall shape of the complex was derived from SAXS data. The residual dipolar coupling data serves to reduce angular degrees of freedom, and the small-angle scattering data serves to confine the translational degrees of freedom. The complex built by this method was found to be consistent with the known crystal structure. The study demonstrates how approximate tertiary structures of modular proteins or quaternary structures composed of subunits can be assembled from high-resolution structures of domains or subunits using mutually complementary NMR and SAXS data.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1302219PMC
http://dx.doi.org/10.1016/S0006-3495(02)75241-7DOI Listing

Publication Analysis

Top Keywords

nmr small-angle
8
small-angle x-ray
8
x-ray scattering
8
scattering data
8
residual dipolar
8
saxs data
8
data serves
8
degrees freedom
8
data
6
quaternary structure
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!