Identification by saturation mutagenesis of a single residue involved in the alpha-galactosidase AgaB regioselectivity.

Glycoconj J

Unité de Recherches sur la Biocatalyse, FRE-CNRS no. 2230 Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, F-44322 Nantes Cedex 03, France.

Published: June 2001

The alpha-galactosidase AgaB of Bacillus stearothermophilus displays a major 1,6 and a minor 1,3 regioselectivity. The wild-type enzyme was subjected to directed evolution (random mutagenesis and in vitro recombination) using a double screening strategy based on the elimination of the 1,6 regioselectivity and the analysis by TLC of the transglycosylation products. One of the AgaB mutants (E500) exhibited a new 1,2 regioselectivity and a rather high level of transglycosylation. The corresponding gene contains 10 mutations compared to the agaB gene and we demonstrated by saturation mutagenesis that the G442R substitution strongly contributes to the emergence of this new regioselectivity. Moreover, other single point mutations at this position led to new mutants displaying other kinds of regioselectivity demonstrating the importance of this position in the subtle kinetic control of transglycosylation.

Download full-text PDF

Source
http://dx.doi.org/10.1023/a:1016034101436DOI Listing

Publication Analysis

Top Keywords

saturation mutagenesis
8
alpha-galactosidase agab
8
regioselectivity
6
identification saturation
4
mutagenesis single
4
single residue
4
residue involved
4
involved alpha-galactosidase
4
agab
4
agab regioselectivity
4

Similar Publications

Mechanism of influence of nattokinase terminal sequence on catalytic performance and molecular modification.

Int J Biol Macromol

March 2025

School of Pharmaceutical Sciences and Institute of Materia Medica, Xinjiang University, Urumqi 830017, China. Electronic address:

Nattokinase from traditional food natto has the potential to be a thrombolytic agent. Its terminal sequence has an important effect on the catalytic performance of nattokinase, but the specific mechanism is still unclear. In this study, computational simulation combined with truncated mutagenesis and alanine scanning technology were used to identify the key sites affecting the catalytic performance of nattokinase.

View Article and Find Full Text PDF

Amyotrophic lateral sclerosis (ALS) is a progressive motor neuron disease for which important subtypes are caused by variation in the Superoxide Dismutase 1 gene . Diagnosis based on sequencing can not only be definitive but also indicate specific therapies available for -associated ALS (SOD1-ALS). Unfortunately, SOD1-ALS diagnosis is limited by the fact that a substantial fraction (currently 26%) of ClinVar SOD1 missense variants are classified as "variants of uncertain significance" (VUS).

View Article and Find Full Text PDF

Enhancing the Stability of Sweet Protein Neoculin for Food Applications Using Computational Strategies.

J Agric Food Chem

March 2025

Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, 92 Weijin Road, Nankai District, Tianjin 300072, P. R. China.

Sweet proteins, known for their high sweetness and low caloric content, offer great potential as safe, low-calorie sweeteners without the negative health effects associated with sugar or artificial alternatives. Neoculin, unique for its dual properties of sweetness and taste-modifying, holds significant promise for food industry applications. However, its low thermal stability limits its broader use in food processing, highlighting the need to improve its stability.

View Article and Find Full Text PDF

Bacillus cereus 0-9 is a biocontrol microorganism that antagonizes Gram-positive bacteria and pathogenic fungi, such as Staphylococcus aureus and Gaeumannomyces graminis, through the secretion of antimicrobial peptides. However, its low antibacterial activity limits its biocontrol application. In this study, a significant enhancement in antibacterial activity against S.

View Article and Find Full Text PDF

Semi-rational engineering of an α-L-fucosidase for regioselective synthesis of fucosyl--acetylglucosamine disaccharides.

Food Chem (Oxf)

June 2025

State Key Laboratory of Microbial Technology, National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-based Medicine, Shandong University, Qingdao 266237, China.

α-L-Fucosidases are attractive biocatalysts for the production of bioactive fucosylated oligosaccharides, however, poor regioselectivity and activity for transglycosylation have significantly limited their applications. We have recently derived an α-L-Fucosidase, BF3242, from NCTC9343, which could efficiently synthesize a mixture of Fuc-α-1,3/1,6-GlcNAc, but its 1,3/1,6-regioselectivity was observably affected by reaction temperature. Here, we integrated loop-targeted random mutagenesis and site-directed mutagenesis to engineer the regioselectivity and transglycosylation activity of BF3242.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!