A new method for the determination of active-enzyme concentration of a glucosidase by using (13)C NMR spectroscopy is reported. The method consists of quantifying the binding between a (13)C-labelled, strong competitive inhibitor, [5-(13)C]-1-azafagomine (1), and the enzyme. The concentration of free inhibitor 1 is measured in a series of binding experiments from the intensity of its NMR signal relative to that of a reference. From a plot of the concentrations of bound vs. free inhibitor 1, the amount of specifically bound 1, that is, the amount of active sites, is determined. From this value, active-enzyme concentration and k(cat) value can be calculated.

Download full-text PDF

Source
http://dx.doi.org/10.1002/1439-7633(20001002)1:3<177::aid-cbic177>3.3.co;2-hDOI Listing

Publication Analysis

Top Keywords

active-enzyme concentration
12
determination active-enzyme
8
free inhibitor
8
direct nmr-spectroscopic
4
nmr-spectroscopic determination
4
concentration
4
concentration titration
4
titration labeled
4
inhibitor
4
labeled inhibitor
4

Similar Publications

Cold-adapted microorganisms possess cold-active enzymes with potential applications in different industries and research areas. In this study, two genes encoding β-d-galactosidases belonging to Glycoside Hydrolase families 2 and 42 from the psychrotolerant Arctic bacterium sp. S3* were cloned, expressed in and , purified and characterized.

View Article and Find Full Text PDF

(EF) is a traditional Chinese herbal medicine, and its primary bioactive ingredients, such as icariin, are flavonoid glycosides. A rare EF flavonoid, baohuoside I, exhibits superior bioactivities and enhanced bioavailability compared to its metabolic precursor icariin. The biotransformation of icariin to baohuoside I can be effectively and specifically achieved by β-glucosidases.

View Article and Find Full Text PDF

Efficient periplasmic expression of active lysyl endopeptidase and optimizing the purification methods.

Protein Expr Purif

February 2025

Nano-Biotechnology Department, New Technologies Research Group, Pasteur Institute of Iran, Tehran, Iran. Electronic address:

Recombinant production of lysyl endopeptidase (Lys-C) which is frequently used in proteomics is still challenging due to its complex structure. Herein, periplasmic expression and determining effective factors for recovery of the active enzyme were investigated. The codon-optimized Lys-C gene was cloned into pET26b (+) for periplasmic expression in E.

View Article and Find Full Text PDF

The increase in industrialization has led to a significant energy crisis, sparking interest in lignocellulosic biomass for fuel ethanol production because of its renewable characteristics. The complex composition of this biomass requires pretreatment to reduce inhibitors like furfural and hydroxymethylfurfural (HMF), which hinder enzymatic hydrolysis and fermentation, ultimately decreasing ethanol yields. This study investigates the detoxification mechanisms of furan aldehydes in Scheffersomyces stipitis, particularly through the upregulation of genes SsOYE2.

View Article and Find Full Text PDF

Kinetic and Mechanistic Studies of Human Oligoadenylate Synthetase 1.

Biochemistry

October 2024

Redona Therapeutics (formerly Twentyeight-Seven Therapeutics), 490 Arsenal Way, Watertown, Massachusetts 02472, United States.

Oligoadenylate synthetase 1 (OAS1) catalyzes the dsRNA-dependent polymerization of ATP to form oligoadenylate, a second messenger of the innate immunity system. This paper reports kinetic and mechanistic studies of OAS1-catalyzed dimerization of ATP to form 2'-5'-diadenylate and pyrophosphate (PP), the first step in ATP polymerization. Major findings include the following: (1) Reaction progress curves for the production of PP are biphasic, characterized by a presteady-state lag followed by the linear, steady-state production of PP.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!