A conformational search procedure (HUNTER), in combination with the MM3(92) program, was used for the exploration of the conformational hypersurface of alkyl-substituted cyclohexanes and for the calculation of their chair/twist-boat (TB) energy gap. The systems studied were conformationally unconstrained polyalkylcyclohexanes (alkyl = methyl, ethyl, isopropyl, and tert-butyl) possessing either geminal and/or vicinal arrangements of the alkyl groups, but differing in the number of alkyl substituents and in their relative disposition (i.e., cis or trans). The calculations indicate that in 1,1,3,3,5,5-hexaisopropylcyclohexane the TB is the lowest energy form. Modification of the cis,trans relationship of vicinal alkyl groups changes the chair/TB energy gap, and in the minimum energy conformation of cis,trans,trans-1,2,3,4-tetraisopropylcyclohexane (23c) and cis,syn,cis-1,2,4,5-tetraisopropylcyclohexane (31c) the cyclohexyl ring adopts a TB conformation. The tetrasubstituted systems cis,syn,cis-1,2-diisopropyl-3,4-dimethylcyclohexane (46), cis,syn,cis-1,4-diisopropyl-2,5-dimethyl-cyclohexane (47), and cis,trans,trans-1,2-diisopropyl-3,4-dimethylcyclohexane (41) are the least crowded monocyclic unconstrained cyclohexanes found in which the TB conformation is of lower energy than the chair form. The present study indicates that two methyls and two isopropyl substituents are sufficient for stabilizing the TB form of a cyclohexyl ring relative to the chair form.
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http://dx.doi.org/10.1021/jo961526y | DOI Listing |
Front Immunol
January 2025
Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia.
Human rhinovirus C (HRV-C) is a significant contributor to respiratory tract infections in children and is implicated in asthma exacerbations across all age groups. Despite its impact, there is currently no licensed vaccine available for HRV-C. Here, we present a novel approach to address this gap by employing immunoinformatics techniques for the design of a multi-epitope-based vaccine against HRV-C.
View Article and Find Full Text PDFNPJ Comput Mater
January 2025
School of Mechanical, Aerospace, and Manufacturing Engineering, University of Connecticut, Storrs, CT USA.
Machine learning has advanced the rapid prediction of inorganic materials properties, yet data scarcity for specific properties and capturing thermodynamic stability remains challenging. We propose a framework utilizing a Graph Neural Network with composition-based and crystal structure-based architectures, combined with a transfer learning scheme. This approach accurately predicts energy-related properties (e.
View Article and Find Full Text PDFDoping in pure materials causes vital alterations in opto-electrical and physicochemical characteristics, which enable the produced doped material to be highly efficient and effective. The current work focused on the synthesis of C/N-co-doped-ZnO nanorods a facile, eco-friendly, and solvent-free mechano-thermal approach. The synthesized C/N-co-doped ZnO nanorods were employed for the photocatalytic decay of methylene blue (MB) and brilliant cresyl blue (BCB) dyes, and their degradation capability was compared with that of pure ZnO nanoparticles prepared a precipitation approach.
View Article and Find Full Text PDFNanoscale
January 2025
Institute of Energy Power Innovation, North China Electric Power University, 2 Benigno Road, Beijing 102206, P. R. China.
The electrocatalytic carbon dioxide reduction reaction (CORR) is an attractive method for converting atmospheric CO into value-added chemicals and fuels. In order to overcome the low efficiency and durability that hinder its practical application, a significant amount of research has been dedicated to designing novel catalysts at the nanoscale and even the atomic scale. Two-dimensional (2D) monolayer materials inherit the merits of both 2D materials and single-atom materials.
View Article and Find Full Text PDFMed Chem
January 2025
Department of Pharmacy, Pisa University, Pisa, Italy.
Background: The rise in the frequency of liver cancer all over the world makes it a prominent area of research in the discovery of new drugs or repurposing of existing drugs.
Methods: This article describes the pharmacophore-based structure-activity relationship (3DQSAR) on the secondary metabolites of Alhagi maurorum to inhibit human liver cancer cell lines Hepatocellular carcinoma (HCC) and hepatoma G2 (HepG2) which represents the molecular level understanding for isolated phytochemicals of Alhagi maurorum. The definite features, such as hydrophobic regions, average shape, and active compounds' electrostatic patterns, were mapped to screen phytochemicals.
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