Stereospecific Grignard-Activated Solid Phase Synthesis of DNA Methylphosphonate Dimers.

J Org Chem

Department of Pharmacology, Thomas Jefferson University, Philadelphia, Pennsylvania 19107-5541.

Published: January 1996

Stereoregular R(p) or S(p) DNA methylphosphonate dimers have been synthesized on a solid phase support. A deprotected 5'-hydroxyl-N(2)-isobutanoyldeoxyguanosine 3'-O-succinate coupled to high-loaded polyethylene glycol (PEG) coated polystyrene beads (HLP) was activated with a Grignard reagent, t-BuMgCl. After activation was complete, a pure diastereoisomer of 5'-(dimethoxytrityl) N-benzoyldeoxynucleoside 3'-(p-nitrophenyl methylphosphonate) p-nitrophenyl ester (R(p) or S(p)) was added. Coupling of the activated 5'-hydroxyl to the 3'-methylphosphonate ensued, releasing nitrophenol, yielding the R(p) or S(p) dimer, respectively. The dimers were then cleaved from the solid support, deprotected, and purified, yielding methylphosphonate DNA dimers of defined stereochemistry.

Download full-text PDF

Source
http://dx.doi.org/10.1021/jo9517499DOI Listing

Publication Analysis

Top Keywords

solid phase
8
dna methylphosphonate
8
methylphosphonate dimers
8
support deprotected
8
stereospecific grignard-activated
4
grignard-activated solid
4
phase synthesis
4
synthesis dna
4
methylphosphonate
4
dimers
4

Similar Publications

In the pursuit of high-energy-density lithium metal batteries (LMBs), the development of stable solid electrolyte interphase (SEI) is critical to address issues such as lithium dendrite growth and low Coulombic efficiency. Herein, we propose a facile strategy for the in-situ fabrication of a LiCl-rich artificial SEI layer on Li surfaces through reaction of MoCl5 with Li (Li@MoCl5). The resulting artificial SEI significantly enhances the uniformity of Li deposition, effectively suppresses dendrite formation, and improves electrochemical performance.

View Article and Find Full Text PDF

Water-regulated viscosity-plasticity phase transitions in a peptide self-assembled muscle-like hydrogel.

Nat Commun

January 2025

Department of Chemistry, School of Science, Westlake University, Hangzhou, Zhejiang Province, China.

The self-assembly of small molecules through non-covalent interactions is an emerging and promising strategy for building dynamic, stable, and large-scale structures. One remaining challenge is making the non-covalent interactions occur in the ideal positions to generate strength comparable to that of covalent bonds. This work shows that small molecule YAWF can self-assemble into a liquid-crystal hydrogel (LCH), the mechanical properties of which could be controlled by water.

View Article and Find Full Text PDF

Recalcitrant bacterial infections can be caused by various types of dormant bacteria, including persisters and viable but nonculturable (VBNC) cells. Despite their clinical importance, we know fairly little about bacterial dormancy development and recovery. Previously, we established a correlation between protein aggregation and dormancy in Escherichia coli.

View Article and Find Full Text PDF

Exploiting agri-food residues for kombucha tea and bacterial cellulose production.

Int J Biol Macromol

January 2025

NBFC - National Biodiversity Future Center, 90133 Palermo, Italy; University of Naples Federico II, Department of Biology, Naples, Italy. Electronic address:

Bio-valorization of agri-food wastes lies in their possible conversion into fermented foodstuffs/beverages and/or biodegradable polymers such as bacterial cellulose. In this study, three different kombucha cultures were formulated using agri-food waste materials, citrus fruit residues and used coffee grounds, as alternative carbon and nitrogen sources, respectively. Over 21 days of fermentation, the kinetic profile was followed by monitoring cell number, pH variation, minerals, trace elements and production of bacterial cellulose.

View Article and Find Full Text PDF

Analysis of multi-class unregulated organic compounds in soil and biosolids using LC-MS/MS.

Environ Pollut

January 2025

Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA; Department of Environmental & Ecological Engineering, Purdue University, West Lafayette, Indiana 47907, USA; Ecological Sciences & Engineering Interdisciplinary Graduate Program, Purdue University, West Lafayette, Indiana 47907, USA.

Numerous unregulated organic compounds (UOCs) including pharmaceuticals, opioids, and personal care products (PCPs) end up in wastewater. UOC presence in biosolids (a wastewater treatment byproduct), which are applied to soil for different reasons raises environmental and health risk concerns. In this study, two multi-class extraction methods were developed and validated to target 111 UOCs from 8 different major families simultaneously in biosolids and biosolids-impacted soil.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!