Genetic variation in the endemic and endangered Rosmarinus tomentosus Huber-Morath & Maire (Labiatae) using RAPD markers. Random amplified polymorphic DNA.

Heredity (Edinb)

Departamento de Biología Vegetal, Escuela Técnica Superior de Ingenieros Agrónomos, Universidad Politécnica de Madrid, Ciudad Universitaria, 28040-Madrid, Spain.

Published: November 2000

Rosmarinus tomentosus Huber-Morath & Maire, an endemic species of southern Spain, is critically endangered as a consequence of habitat destruction by anthropogenic activities. Random amplified polymorphic DNA (RAPD) markers were used for initial evaluation of genetic variation in this species; among zones, among populations (within zones and independently of zones), and among individuals (within populations and zones). The eight primers used to study five populations provided 126 reliable bands, of which 109 (86%) were polymorphic. Analyses of the RAPD markers conducted using different approaches (cluster analysis, Shannon's diversity measure and analysis of molecular variance-AMOVA) showed similar results concerning genetic structure of populations of R. tomentosus. The three zones studied, and their corresponding populations, were clearly defined through UPGMA analysis. AMOVA analyses indicated that 18.0% of the total genetic variation was attributable to differences among zones. When total variance was partitioned without considering the zonal distribution of the populations, 34.1% was attributable to differences among populations, and 65.9% to differences among individuals within populations. Similar results were obtained using Shannon's information measure. Significant genetic distances (Ph(ist) values) were obtained between any two populations. This strong genetic differentiation among zones, populations and subpopulations may be explained by geographical distances and limited gene flow. This study will be of considerable help during subsequent formulations of conservation strategies for the endangered species R. tomentosus.

Download full-text PDF

Source
http://dx.doi.org/10.1046/j.1365-2540.2000.00774.xDOI Listing

Publication Analysis

Top Keywords

genetic variation
12
rapd markers
12
populations
10
rosmarinus tomentosus
8
tomentosus huber-morath
8
huber-morath maire
8
random amplified
8
amplified polymorphic
8
polymorphic dna
8
zones populations
8

Similar Publications

Background: Rapid diagnostic tests (RDTs) are vital for malaria diagnosis, especially in resource-limited areas. RDTs targeting histidine-rich protein 2 (PfHRP2) and its structural homologue PfHRP3 are commonly used for detecting Plasmodium falciparum. However, genetic deletions in these proteins can affect test accuracy.

View Article and Find Full Text PDF

Background: This study conducted genetic analysis on fetuses indicated to be at high risk by non-invasive prenatal testing (NIPT) to explore the etiology.

Methods: Karyotype analysis and single nucleotide polymorphism array (SNP-array) were performed to detect copy number variations in fetal amniotic fluid and parental peripheral blood.

Results: Fetal karyotype showed 46, X?, del (4) (q28q31.

View Article and Find Full Text PDF

High tumour mutational burden (TMB-high), identified through comprehensive genomic profiling (CGP), is a biomarker that predicts the efficacy of immune checkpoint inhibitors. CGP testing is recommended for rare cancers with limited effective treatment options. Here, we provide the first report of a malignant phyllodes tumour of the breast demonstrating TMB-high status and effective treatment with pembrolizumab.

View Article and Find Full Text PDF

Immunotherapy has brought better survival benefits in the treatment of recurrent or metastatic head and neck squamous cell carcinoma (R/M HNSCC). However, owing to the lack of relevant biomarkers that could predict the efficacy of this treatment, it often has to be maintained. Here we report on a patient with stage IVA squamous cell carcinoma of the tongue who developed an unresectable lesion in the neck after surgery and radical chemoradiotherapy.

View Article and Find Full Text PDF

is an opportunistic pathogen primarily associated with nosocomial infections, characterized by a propensity for multi-drug resistance and the potential evolution into hypervirulent strains. Based on its phenotypic and genotypic characteristics, can be classified into two types: classical (cKP) and hypervirulent (hvKP). The spread of mobile genetic elements (MGEs) in has led to the emergence of carbapenem-resistant (CRKP) and carbapenem-resistant hypervirulent (CR-hvKP).

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!