Improved mutation detection in GC-rich DNA fragments by combined DGGE and CDGE.

Nucleic Acids Res

Department of Medical Genetics, University of Groningen, Antonius Deusinglaan 4, 9713 AW Groningen, The Netherlands.

Published: August 1999

Denaturing gradient gel electrophoresis (DGGE) has proven to be a powerful pre-screening method for the detection of DNA variants. If such variants occur, however, in DNA fragments that are very rich in G and C, they may escape detection. To overcome this limitation, we tested a novel gel system which combines DGGE and constant denaturant gel electrophoresis (CDGE), as it might have the advantages of both methods. Indeed, this combination had the advantages of both methods, good separation of hetero-duplex molecules and prevention of total strand dissociation, and it proved successful in the detection of DNA variants in several GC-rich fragments.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC148520PMC
http://dx.doi.org/10.1093/nar/27.15.e9DOI Listing

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