Publications by authors named "Zohreh Farsi"

The circular RNA (circRNA) Cdr1as is conserved across mammals and highly expressed in neurons, where it directly interacts with microRNA miR-7. However, the biological function of this interaction is unknown. Here, using primary cortical murine neurons, we demonstrate that stimulating neurons by sustained depolarization rapidly induces two-fold transcriptional upregulation of Cdr1as and strong post-transcriptional stabilization of miR-7.

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Human genetic studies have revealed rare missense and protein-truncating variants in GRIN2A, encoding for the GluN2A subunit of the NMDA receptors, that confer significant risk for schizophrenia (SCZ). Mutations in GRIN2A are also associated with epilepsy and developmental delay/intellectual disability (DD/ID). However, it remains enigmatic how alterations to the same protein can result in diverse clinical phenotypes.

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Article Synopsis
  • Scientists found a special type of mouse that can help us learn more about schizophrenia, a mental illness that affects how people think and feel.
  • These mice have a change in a specific gene that is linked to a higher risk of getting schizophrenia.
  • The research showed that these mice have differences in brain activity, chemical signals, and strange movement patterns, helping to understand potential causes of schizophrenia better.
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Schizophrenia is a debilitating psychiatric disorder that affects millions of people worldwide; however, its etiology is poorly understood at the molecular and neurobiological levels. A particularly important advance in recent years is the discovery of rare genetic variants associated with a greatly increased risk of developing schizophrenia. These primarily loss-of-function variants are found in genes that overlap with those implicated by common variants and are involved in the regulation of glutamate signaling, synaptic function, DNA transcription, and chromatin remodeling.

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Article Synopsis
  • Schizophrenia is a complex psychiatric disorder with significant genetic influences, but its causes and biological mechanisms are still not well understood.
  • Research has discovered rare genetic mutations in GRIN2A and AKAP11 that raise the risk of developing schizophrenia, as well as being linked to conditions like bipolar disorder and epilepsy.
  • EEG studies in mutant mice lacking these genes showed abnormal brain activity patterns, which resemble those seen in human schizophrenia, suggesting these mice could be useful models for understanding the disorder and developing potential biomarkers.
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  • * The patient was hospitalized at 29 weeks due to elevated liver enzymes, later tested positive for COVID-19, leading to complications like placental insufficiency affecting two of the three fetuses.
  • * Following a cesarean section, one baby survived while the other two unfortunately died shortly after birth; the mother recovered and was discharged in good condition three days later.
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Mammalian central synapses exhibit vast heterogeneity in signaling strength. To understand the extent of this diversity, how it is achieved, and its functional implications, characterization of a large number of individual synapses is required. Using glutamate imaging, we characterized the evoked release probability and spontaneous release frequency of over 24,000 individual synapses.

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CLC chloride/proton exchangers may support acidification of endolysosomes and raise their luminal Cl concentration. Disruption of endosomal ClC-3 causes severe neurodegeneration. To assess the importance of ClC-3 Cl /H exchange, we now generate Clcn3 mice in which ClC-3 is converted into a Cl channel.

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Article Synopsis
  • Newly-formed synaptic vesicles (SVs) rely on vATPases for rapid acidification, creating a proton gradient critical for loading neurotransmitters.
  • Clathrin-coated vesicles (CCVs) were isolated from mouse brain to investigate when these vesicles acidify and refill during synaptic activity.
  • The study found that while CCVs have functional vATPases, their acidification is inhibited by the clathrin coat, suggesting this inhibition is key for the timing of SV refilling.
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Accumulation of neurotransmitters in the lumen of synaptic vesicles (SVs) relies on the activity of the vacuolar-type H -ATPase. This pump drives protons into the lumen, generating a proton electrochemical gradient (Δμ ) across the membrane. Recent work has demonstrated that the balance between the chemical (ΔpH) and electrical (ΔΨ) components of Δμ is regulated differently by some distinct vesicle types.

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The serotonin transporter (SERT) mediates Na-dependent high-affinity serotonin uptake and plays a key role in regulating extracellular serotonin concentration in the brain and periphery. To gain novel insight into SERT regulation, we conducted a comprehensive proteomics screen to identify components of SERT-associated protein complexes in the brain by employing three independent approaches. In vivo SERT complexes were purified from rat brain using an immobilized high-affinity SERT ligand, amino-methyl citalopram.

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In this chapter, we introduce the combined use of FRET-based biosensors and synaptic markers as an effective tool for studying intracellular signaling pathways in small synaptic terminals of neuronal cells. The approach is based on the unmixing of excitation/emission spectral fingerprints of a FRET donor and acceptor pair, as well as a lipophilic styryl dye, FM1-43, loaded into presynaptic terminals. The destaining of FM1-43 during evoked release provides a map to guide the sampling of fluorescence for FRET analysis.

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Synaptic transmission is mediated by the release of neurotransmitters, which involves exo-endocytotic cycling of synaptic vesicles. To maintain synaptic function, synaptic vesicles are refilled with thousands of neurotransmitter molecules within seconds after endocytosis, using the energy provided by an electrochemical proton gradient. However, it is unclear how transmitter molecules carrying different net charges can be efficiently sequestered while maintaining charge neutrality and osmotic balance.

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Voltage-gated KV 10.1 potassium channels are widely expressed in the mammalian brain but their function remains poorly understood. We report that KV 10.

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There is huge number of oligomeric proteins that show allosteric behaviour as soon as their allosteric effector is provided. Thermus sp. GH5 methylglyoxal synthase is also a homohexameric protein, which displays cooperative behaviour when phosphate concentration increases.

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Cellular membrane fusion is thought to proceed through intermediates including docking of apposed lipid bilayers, merging of proximal leaflets to form a hemifusion diaphragm, and fusion pore opening. A membrane-bridging four-helix complex of soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) mediates fusion. However, how assembly of the SNARE complex generates docking and other fusion intermediates is unknown.

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