Background: Multiplexed immunofluorescence (mIF) staining, such as CODEX and MIBI, holds significant clinical value for various fields, such as disease diagnosis, biological research, and drug development. However, these techniques are often hindered by high time and cost requirements.
Methods: Here we present a Multimodal-Attention-based virtual mIF Staining (MAS) system that utilises a deep learning model to extract potential antibody-related features from dual-modal non-antibody-stained fluorescence imaging, specifically autofluorescence (AF) and DAPI imaging.
Introduction: Age-related macular degeneration (AMD) is a prevalent, chronic and progressive retinal degenerative disease characterized by an inflammatory response mediated by activated microglia accumulating in the retina. In this study, we demonstrate the therapeutically effects and the underlying mechanisms of microglial repopulation in the laser-induced choroidal neovascularization (CNV) model of exudative AMD.
Methods: The CSF1R inhibitor PLX3397 was used to establish a treatment paradigm for microglial repopulation in the retina.
Predicting the occurrence of nonproliferative diabetic retinopathy (NPDR) using biochemical parameters is invasive, which limits large-scale clinical application. Noninvasive retinal oxygen metabolism and hemodynamics of 215 eyes from 73 age-matched healthy subjects, 90 diabetic patients without DR, 40 NPDR, and 12 DR with postpanretinal photocoagulation were measured with a custom-built multimodal retinal imaging device. Diabetic patients underwent biochemical examinations.
View Article and Find Full Text PDFBACKGROUNDThe tumor immune microenvironment can provide prognostic and therapeutic information. We aimed to develop noninvasive imaging biomarkers from computed tomography (CT) for comprehensive evaluation of immune context and investigate their associations with prognosis and immunotherapy response in gastric cancer (GC).METHODSThis study involved 2,600 patients with GC from 9 independent cohorts.
View Article and Find Full Text PDFDeep neural networks (DNNs) extract thousands to millions of task-specific features during model training for inference and decision-making. While visualizing these features is critical for comprehending the learning process and improving the performance of the DNNs, existing visualization techniques work only for classification tasks. For regressions, the feature points lie on a high dimensional continuum having an inherently complex shape, making a meaningful visualization of the features intractable.
View Article and Find Full Text PDFPurpose: To investigate changes in foveal avascular area (FAZ) and retinal vein diameter in patients with retinal vein occlusion (RVO) after intravitreal ranibizumab, and to analyze the correlation between ranibizumab therapy and visual gain.
Methods: This retrospective study enrolled 95 eyes of 95 patients who had accepted three consecutive monthly ranibizumab injections, including 50 branch RVOs (BRVOs) and 45 central RVOs (CRVOs). BRVOs were divided into ischemia group ( = 32) and non-ischemia group ( = 18), and CRVOs also had ischemia group ( = 28) and non-ischemia group ( = 17).
IEEE Trans Neural Netw Learn Syst
June 2024
Deep learning-based diagnosis is becoming an indispensable part of modern healthcare. For high-performance diagnosis, the optimal design of deep neural networks (DNNs) is a prerequisite. Despite its success in image analysis, existing supervised DNNs based on convolutional layers often suffer from their rudimentary feature exploration ability caused by the limited receptive field and biased feature extraction of conventional convolutional neural networks (CNNs), which compromises the network performance.
View Article and Find Full Text PDFThe retina is one of the most metabolically active tissues in the body. The dysfunction of oxygen kinetics in the retina is closely related to the disease and has important clinical value. Dynamic imaging and comprehensive analyses of oxygen kinetics in the retina depend on the fusion of structural and functional imaging and high spatiotemporal resolution.
View Article and Find Full Text PDFEmbedding high-dimensional data onto a low-dimensional manifold is of both theoretical and practical value. In this article, we propose to combine deep neural networks (DNN) with mathematics-guided embedding rules for high-dimensional data embedding. We introduce a generic deep embedding network (DEN) framework, which is able to learn a parametric mapping from high-dimensional space to low-dimensional space, guided by well-established objectives such as Kullback-Leibler (KL) divergence minimization.
View Article and Find Full Text PDFUltrasound beamforming is a principal factor in high-quality ultrasound imaging. The conventional delay-and-sum (DAS) beamformer generates images with high computational speed but low spatial resolution; thus, many adaptive beamforming methods have been introduced to improve image qualities. However, these adaptive beamforming methods suffer from high computational complexity, which limits their practical applications.
View Article and Find Full Text PDFIEEE Trans Neural Netw Learn Syst
February 2021
Recently, the use of portable equipment has attracted much attention in the medical ultrasound field. Handheld ultrasound devices have great potential for improving the convenience of diagnosis, but noise-induced artifacts and low resolution limit their application. To enhance the video quality of handheld ultrasound devices, we propose a low-rank representation multipathway generative adversarial network (LRR MPGAN) with a cascade training strategy.
View Article and Find Full Text PDFIEEE J Biomed Health Inform
April 2020
In the medical ultrasound field, ultrafast imaging has recently become a hot topic. However, the diagnostic reliability of ultrafast high-frame rate plane-wave (PW) imaging is reduced by its low-quality images. The medical ultrasound equipment on the market usually adopts the line-scanning mode, which can obtain high-quality images at a very low frame rate.
View Article and Find Full Text PDFIEEE Trans Biomed Eng
January 2020
As a widely used imaging modality in the medical field, ultrasound has been applied in community medicine, rural medicine, and even telemedicine in recent years. Therefore, the development of portable ultrasound devices has become a popular research topic. However, the limited size of portable ultrasound devices usually degrades the imaging quality, which reduces the diagnostic reliability.
View Article and Find Full Text PDFIEEE Trans Ultrason Ferroelectr Freq Control
November 2018
In recent years, plane-wave imaging (PWI) has attracted considerable attention because of its high temporal resolution. However, the low spatial resolution of PWI limits its clinical applications, which has inspired various studies on the high spatial resolution reconstruction of PW ultrasound images. Although compounding methods and traditional high spatial resolution reconstruction approaches can improve the image quality, these techniques decrease the temporal resolution.
View Article and Find Full Text PDFRecently, advances in computers and high-speed communication tools have led to enhancements in remote medical consultation research. Laws in some localities require hospitals to encrypt patient information (including images of the patient) before transferring the data over a network. Therefore, developing suitable encryption algorithms is quite important for modern medicine.
View Article and Find Full Text PDF