The dynamics of N-methyladenine RNA modification in interactions between rice and plant viruses.

Background: N-methyladenosine (mA) is the most common RNA modification in eukaryotes and has been implicated as a novel epigenetic marker that is involved in various biological processes. The pattern and functional dissection of mA in the regulation of several major human viral diseases have already been reported. However, the patterns and functions of mA distribution in plant disease bursting remain largely unknown.

Phylodynamics and Codon Usage Pattern Analysis of Broad Bean Wilt Virus 2.

Broad bean wilt virus 2 (BBWV-2), which belongs to the genus of the family , is an important pathogen that causes damage to broad bean, pepper, yam, spinach and other economically important ornamental and horticultural crops worldwide. Previously, only limited reports have shown the genetic variation of BBWV2. Meanwhile, the detailed evolutionary changes, synonymous codon usage bias and host adaptation of this virus are largely unclear.

Comprehensive codon usage analysis of rice black-streaked dwarf virus based on P8 and P10 protein coding sequences.

Rice black-streaked dwarf virus (RBSDV) belongs to the genus Fijivirus of the family Reoviridae and is an important pathogen that damages rice, maize and wheat worldwide. Previously, several reports have described the genetic variation and population structure of RBSDV. However, the details of the evolutionary changes, synonymous codon usage patterns and host adaptation of the virus are largely unclear.

Genetic changes and host adaptability in sugarcane mosaic virus based on complete genome sequences.

Sugarcane mosaic virus (SCMV), a member of the genus Potyvirus in the family Potyviridae, is an important pathogen that causes mosaic diseases in maize, sugarcane, canna and other graminaceous species worldwide. Previously, several reports have showed the genetic variation and population structure of SCMV. However, the evolutionary dynamics, synonymous codon usage pattern and adaptive evolution of the virus is unclear.