Publications by authors named "Zhi-Jing Xie"

Article Synopsis
  • Functional traits are key indicators that show how organisms adapt to environmental changes and influence various ecosystem functions, especially in soil animals.
  • Understanding soil animal biodiversity—through species, phylogenetic, and functional diversity—helps us grasp distribution patterns, community assembly, and their overall ecosystem roles.
  • The review emphasizes the need for better research on eco-evolutionary processes affecting soil animal traits, creating a trait database, and using trait-based approaches for ecological restoration to enhance soil biodiversity and ecosystem sustainability.
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H9N2 IAV infection contributed to P. aeruginosa coinfection, causing severe hemorrhagic pneumonia in mink. In this study, the in vitro alveolar macrophage models were developed to investigate the innate immune responses to P.

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In this study, whether H9N2 influenza A virus (IAV) infection contributed to secondary Klebsiella pneumoniae infection was investigated. From post-infection onwards, clinical symptoms were monitored, examined and recorded daily for 11 days. As a result, no clinical signs were observed in the mice infected with single H9N2 IAV, implying that H9N2 IAV was less pathogenic to mice.

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In this study, the infectious RF-DNA clones of two mink enteritis viruses, MEV-SD1 and MEV-SD7, were constructed, which generated progeny virions and seemed to contain an almost or completely full-length genome. The genomes of MEV-SD1 and MEV-SD7 were 5162 bp and 5113 bp in length, respectively. The genomic organizations of MEV-SD1 and MEV-SD7 were similar to that of the other carnivore parvoviruses.

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In this study, eight H9N2 IAVs were isolated from infected diseased, farmed raccoon dogs and arctic foxes. Eight genes shared 98.6%-100% identity among the isolates possessing a PSRSSR/GL motif at the HA cleavage site, which is same as the motif of G1 and Y280 lineages of H9N2 IAVs.

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Influenza A virus (IAV) and bacteria co-infection can influence the host clinical conditions. Both H9N2 IAV and Pseudomonas aeruginosa (P. aeruginosa) are potential pathogens of respiratory diseases in mink.

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In this study, 20 P. aeruginosa strains were isolated from 112 farmed mink exhibiting hemorrhagic pneumonia in mideastern Shandong province, China. Serotype G (18/20) was the dominant serotype among the isolates with prevalence in mink, followed by serotype B (1/20), serotype C (1/20).

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Article Synopsis
  • Duck viral hepatitis (DVH), caused by the duck hepatitis A virus (DHAV), leads to severe liver damage and bleeding.
  • The study found that the protein IGF2BP1 interacts specifically with the 3' UTR of DHAV-1, enhancing the translation of viral proteins without affecting the virus's replication in duck embryo cells.
  • Increased expression of IGF2BP1 was linked to greater accumulation of viral proteins, suggesting its positive role in the translation process of DHAV-1.
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The nuclear localization signals (NLS) were usually composed of basic residues (K and R) and played an important role in delivery of genomes and structural protein into nucleus. In this research, we identified that 3D/3CD entered into nucleus during viral propagation of duck hepatitis A virus type 1 (DHAV-1). To investigate the reason that 3D/3CD entered into nucleus, the amino acid sequence of 3CD was analyzed through NLS Mapper program.

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The duck hepatitis A virus type 1 (DHAV-1) is a member of family, the genome of the virus contains a 5' untranslated region (5' UTR), a large open reading frame that encodes a polyprotein precursor and a 3' UTR followed by a poly(A) tail. The translation initiation of virus proteins depends on the internal ribosome-entry site (IRES) element within the 5' UTR. So far, little information is known about the role of the 3' UTR and poly(A) tail during the virus proliferation.

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Article Synopsis
  • Three parvoviruses named RDPV-DP1, RDPV-DP2, and RDPV-DP3 were isolated from raccoon dogs suffering from severe enteritis, exhibiting high genetic similarity to canine parvovirus (CPV) strains.
  • These RDPVs demonstrated mutations in their VP2 protein that align them closely with original CPV-2 variants, indicating a potential evolution and adaptation to their hosts.
  • Phylogenetic analysis showed that these new RDPVs are grouped closely with specific CPV isolates from raccoon dogs and foxes, suggesting they are virulent and continuously evolving within their host species in China.
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In the study, 15 K. pneumoniae strains were isolated from the mink experiencing respiratory distress in mideastern Shandong province, China, and the prevalence of K. pneumoniae in the sampled mink was 11.

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H9N2 influenza A virus (IAV) causes low pathogenic respiratory disease and infects a wide range of hosts. In this study, six IAVs were isolated from mink and identified as H9N2 IAV. Sequence analysis revealed that the six isolates continued to evolve, and their PB2 genes shared high nucleotide sequence identity with H7N9 IAV.

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Six feline panleukopenia viruses (FPV) were detected in the intestinal samples from the 176 mink collected in China during 2015 to 2016, named MEV-SD1, MEV-SD2, MEV-SD3, MEV-SD4, MEV-SD5 and MEV-SD6. The VP2 genes of the isolates shared 98.9%-100% identity with the reference sequences.

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The circulation of duck hepatitis A virus types 1 (DHAV-1) and 3 (DHAV-3) in Southeast Asia has resulted in a continuously changing epidemiological scenario. In this study, a duplex real-time PCR assay for simultaneous quantitative detection of DHAV-1 and DHAV-3 was established, and 200 liver samples from dead ducklings collected from 31 different flocks in Shandong province, China, were tested. Fifty-eight (29.

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In mid-August 2013, two H9N2 influenza viruses, named A/mink/Shandong/F6/2013 (Mk/SD/F6/13) and A/mink/Shandong/F10/2013 (Mk/SD/F10/13), were isolated from lung samples of 2 of 45 farmed mink exhibiting respiratory signs in mideastern Shandong province, China. The seroprevalence of antibodies to H9N2 in mink was 20% (53/265). Based on sequence analysis, the eight nucleotide sequences showed 99.

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Article Synopsis
  • - The H5N2 influenza virus, isolated from a symptomatic dog in China in 2009, has been confirmed to transmit between dogs but its transmission to other species was unclear.
  • - Contact exposure experiments were conducted with susceptible cats and chickens housed near infected dogs, revealing that one cat showed clear infection and others had seroconversion, while eight chickens displayed signs of illness and two died.
  • - The results suggest that close contact with H5N2-infected dogs can lead to the virus spreading to both cats and chickens, indicating possible interspecies transmission.
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To reveal the genetic variation of the viral protein 1 (VP1) gene of the duck hepatitis A virus type 3 (DHAV-3), the VP1 gene of 13 virulent DHAV-3 strains isolated from Shandong province of China in 2012 were amplified by RT-PCR, sequenced and analyzed. The results showed that all the VP1 genes of the 13 isolates contained 720 nucleotides encoding 240 amino acids, and shared with nucleotide identities of 94. 6%-99.

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Article Synopsis
  • Duck hepatitis A virus (DHAV) causes a severe and lethal disease in young ducklings, with two types identified in China: DHAV-1 and DHAV-3.
  • A duplex RT-PCR assay was developed to effectively identify mixed infections of DHAV-1 and DHAV-3, demonstrating high specificity, sensitivity, and a detection limit of 10pg RNA from duck liver samples.
  • The study found that out of 60 liver samples from various provinces, 57.7% of flocks showed mixed infections, while 34.6% had single infections, highlighting the assay's potential for rapid and cost-effective diagnosis.
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The capsid protein (CP) of duck circovirus (DuCV) is the major immunogenic protein and has a high proportion of arginine residues concentrated at the N terminus of the protein, which inhibits efficient mRNA translation in prokaryotic expression systems. In this study, we investigated the subcellular distribution of DuCV CP expressed via recombinant baculoviruses in Sf9 cells and the DNA binding activities of the truncated recombinant DuCV CPs. The results showed that two independent bipartite nuclear localization signals (NLSs) situated at N-terminal 1-17 and 18-36 amino acid residue of the CP.

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Article Synopsis
  • The porcine parvovirus JT strain (PPV-JT) was identified in a piglet with heart inflammation in Shandong, China, back in 2010.
  • Researchers sequenced the entire genome of PPV-JT, which is 4,941 base pairs long, using DNA from replicated forms.
  • The analysis suggests that PPV-JT could have undergone recombination, providing insights into the virus's molecular traits and evolution in China.
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In 2009, an influenza virus (IV), A/canine/Shandong/JT01/2009 (CA/SD/JT01/09), was isolated from the dog exhibiting respiratory signs in China, and was a novel H5N2. Intraspecies transmission of the virus in dog population had thus far remained unclear. To determine whether the novel H5N2 was transmitted among dogs, we conducted contact exposure and inoculation experiments.

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To investigate molecular epidemiology of DuCV in Cherry Valley ducks in China, the complete genomes of six DuCV strains, which were detected from Cherry Valley ducks in China between 2007 and 2008, were sequenced. Sequence and phylogenetic analysis were carried out to compare these six strains with another 27 DuCV strains from Mulard duck, Muscovy duck, Pekin ducks and Mule duck. The analysis showed that the six DuCV strains exhibited typical genetic features of the family of DuCV, such as a stem-loop structure, three major open reading frames (Rep, Cap and ORF3), four intergenic repeats and the conserved motifs for rolling circle replication and for the dNTP binding domain located in the Rep protein.

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Duck circovirus (DuCV) is classified in the genus Circovirus of the Circoviridae family. Two major open reading frames (ORFs), encoding the replicase (ORF1/rep) and the capsid protein (ORF2/cap), have been recognized for DuCV. Sequence analysis show that another major conserved ORF (named ORF3) is located in the complementary strand of ORF1/rep of DuCV, and its function remains to be investigated.

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Article Synopsis
  • - We found three new parvovirus variants in China from different animals.
  • - The blue fox variant is related to feline parvovirus but has a specific mutation (A300P) in the VP2 protein.
  • - The variants from the raccoon dog and masked civet are similar to canine parvovirus-2a but show a different mutation (G300S) in the VP2 protein.
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