Publications by authors named "Zaiping Li"

Gene targeting using short interfering RNA (siRNA) has become a common strategy to explore gene function because of its prominent efficacy and specificity. The human transmembrane 4 superfamily member 4 (TM4SF4) was originally identified in intestine and liver as a cell proliferation-related gene. Recently, it showed an increased expression in the hepatocellular carcinoma (HCC) tissues.

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The human transmembrane 4 superfamily member 4 or intestinal and liver tetraspan membrane protein (TM4SF4/il-TMP) was originally cloned as an intestinal and liver tetraspan membrane protein and mediates density-dependent cell proliferation. The rat homolog of TM4SF4 was found to be up-regulated in regenerating liver after two-thirds hepatectomy and overexpression of TM4SF4 could enhance liver injury induced by CCl(4). However, the expression and significance of TM4SF4/il-TMP in liver cancer remain unknown.

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Background/aims: Transmembrane 4 superfamily member 4 (TM4SF4) is up-regulated in regenerating liver after partial hepatectomy in rats, but the in vivo functions of this protein are still largely unknown. Therefore, we investigated the role of TM4SF4 during liver injury.

Methods: Expression of TM4SF4 was analyzed by RT-PCR and Western blotting in normal and CCl4-injured rats.

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The cDNA encoding Kringle 1-5 domains of human plasminogen (designated as K1-5), obtained from HepG2 by RT-PCR, was cloned into expression vector pHIL-S1. The recombinant plasmid pHIL-K1-5 was transformed into Pichia pastoris GS115 and the recombinant yeast was induced by methanol to express the recombinant protein. The expressed protein was purified by lysine affinity chromatography.

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A novel mouse gene mLPTS was cloned by EST assembling, RT-PCR and DNA sequencing. The gene fragment for mLPTS is 1244 bp in length, encoding a protein of 332 amino acids. The amino acid sequence of mLPTS has 78% homologue with that of LPTS gene, which is a novel liver cancer-related gene identified through positional candidate cloning stratage by our laboratory.

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The cDNA encoding Kringle 1-4 and part of Kringle 5 domains of human plasminogen (K1-4.5), obtained from HepG2 by RT-PCR, was cloned into expression vector pHIL-S1. The recombinant plasmid pHIL-K1-4.

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Nuclear matrix attachment regions (MARs) play a crucial role in chromatin architecture, gene expression, and DNA replication. Although it is well known that yeast autonomously replicating sequences (ARSs) bind nuclear matrix and MARs also function as ARS elements in yeast, whether a heterologous MAR or ARS element acts as a replication origin in the chromosome has not been elucidated. We previously identified a MAR (rMAR) located in the nontranscribed spacer (NTS) of silkworm Attacus ricini rDNA.

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Aim: To evaluate the function of the longer transcripts LPTS-L in hepatocellular carcinoma cell line SMMC-7721.

Methods: SMMC-7721 cells were transfected with LPTS-L expression construct and stably transfected cells were selected by G418. Multiple single clones formed and were checked for their phenotype.

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Restin, a homologous protein of endostatin (62% homology), is the NC domain of collagen XV at C-terminal. The recombinant restin expressed in E. coli had the ability to suppress the proliferation of bovin aortic endothelial cells and cause apoptosis.

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There is a highly homologous region in the C domain of the EGF family, some of its residues are semi-conserved. We constructed three hTGF-alpha mutants, hTGF-alphaV35, hTGF-alphaQ44, hTGF-alphaY45R46, by site-directed mutagenesis to replace the semi-conserved residues in the C domain of hTGF-alpha with the corresponding residues of hEGF. We observed that although the binding affinity of hEGF to hEGF receptor was about two fold that of hTGF-alpha, but the receptor binding affinity of the three mutants was respectively decreased to about 22 %, 13.

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Article Synopsis
  • The study identifies a specific scaffold-associated region (SAR) of the silkworm Attacus ricini rRNA gene, revealing its role in replication activity.
  • The plasmid containing a small fragment of SAR demonstrated significantly higher replication efficiency compared to the full SAR sequence, indicating that certain sequences contribute positively to ARS activity.
  • Findings suggest that SAR is evolutionarily conserved with a clear correlation between SAR and ARS functions, paving the way for further exploration of regulatory elements within SAR.
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By exchanging the N domain and C domain of hEGF and hTGF-alpha genes by PCR, two chimeras E-TGF(EGF(1-32)-TGF-alpha(34-50))and T-EGF(TGF-alpha(1-33)-EGF(33-53))were constructed. The wild and chimeric molecules were expressed in E.coli under phoA system.

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Expression of Human Epiregulin in E.coli.

Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai)

January 2000

Human epiregulin cDNA was amplified from the lung cancer cell line A549 using RT-PCR. After adding 6 His codon to its 3' end, it was cloned into a high efficient secretive Escherichia coli system with alkaline phosphatase promoter(phoA promoter)constructed in our lab and induced for expression. The product was purified one-step by Ni-NTA column.

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Article Synopsis
  • The GST fusion protein expression system, along with the protein truncation test (PTT) protocol, was employed to identify gene frame shift mutations in the Lis1 gene from hepatocarcinoma samples.
  • Cloning the RT-PCR products into a GST expression vector and expressing them in E. coli led to the unexpected production of a truncated 33 kD protein instead of the expected 71 kD full-length protein.
  • Sequencing revealed an insertion mutation that caused premature termination of translation, demonstrating that the enhanced PTT assay is a quick and effective method for detecting frame shift mutations in genes.
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Preliminary investigation on the mechanism of the growth inhibition by recombinant epiregulin(EPI)of epidermal carcinoma cell A431 is reported. Northern blotting indicated that the mRNA level of cyclin dependent kinase(CDK)inhibitor, p21(WAF1/CIP1), was increased significantly after stimulation of the recombinant epiregulin protein. Luc reporter revealed that STAT1 could bind the promoter region of p21 in response to the EPI signal.

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Article Synopsis
  • A 1 kb scaffold-attachment region (SAR) from the silkworm’s rRNA gene was cloned into a vector for studying gene expression.
  • The SAR increased luciferase gene expression by up to 15 times in stable cell lines but had no significant effect in transient transfections.
  • The SAR likely requires integration into chromosomal DNA and binds to nuclear matrix proteins, which may be crucial for its role in enhancing transcription.
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Article Synopsis
  • The SSH technique was employed to identify up-regulated genes in regenerating rat liver by comparing cDNA from regenerative tissue (tester) with that from normal liver (driver).
  • A library of 900 clones was created, leading to the identification of 50 clones with significant overexpression linked to liver regeneration.
  • Sequencing revealed 37 genes associated with liver regeneration, including 13 known genes, 15 previously unreported genes, and 9 novel genes, indicating their potential important roles in liver regeneration processes.
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Primary hepatocellular carcinoma(HCC) is one of the common malignant tumors in China. In our previous work, a gene named fup1(function-unknown protein 1) was isolated that was expressed differently in HCC and in normal liver. We assumed that it might be a candidate oncogene for the HCC.

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Human angiostatin cDNA was amplified from human hepatoma cell line HepG2 using RT-PCR and was cloned into pPIC9K vector. Recombinant Pichia pastoris strain with 4 copies of angiostatin gene was obtained. Recombinant protein was purified by lysine-affinity Sepharose column and the finally purified angiostatin was 25 mg/L, higher than previously reported 17 mg/L.

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Restin, a homologous protein of endostatin, was found by Ramchandran et al. It was the C-terminal fragment of type XV collagen. To analysis the inhibition activity of mouse restin on the proliferation of endothelial cells, the cDNA of restin was amplified from the total RNA of the mouse muscle and cloned into the prokaryotic expression plasmid pQE32.

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We have constructed a double-recombinant virus BacHL4.2 containing both the chimeric heavy- and light-chain cDNAs from monoclonal antibody of the HBsAg gene. Both murine-human chimeric antibody heavy- and light-chain were expressed in Sf9 cells infected with a double-recombinant virus BacHL4.

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Human GM-CSF cDNA fragment encoding the mature GM-CSF was obtained by using RT-PCR method with total RNA extracted from induced human fetal lung cells HFL. The sequence of the h GM-CSF cDNA thus obtained was the same as those reported. In order to get expression of a high level in, the 5' terminal nucleotide sequence of hGM-CSF cDNA was modified by using PCR.

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Interactions between the RNA transcript of the tumor suppressor cDNA clone, p14-6 (the 3'untranslated region of the nuclear factor for human interleukin-6; NF-IL6 3'UTR), and the reversion-related proteins BNF, were investigated. It was found that: (1) the recognition site of the RNA for BNFs was a 24-nucleotide segment located within the 3'-proximal U-rich sequence; (2) the BNFs were a group of proteins which may interact with each other before interacting with a site on the RNA as a protein complex; (3) possibly only one protein in the complex, namelyR62, directly bound to the RNA site.

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For the detection of HBV variants in patients vaccinated with HBV vaccine but failed to be protected, 16 children patients were studied by using the polymerase chain reaction (PCR) to amplify the HBV S gene fragment. To increase the sensitivity, a nested PCR method was used. These 10 HBV S gene fragments amplified from patients were cloned into M13mp18 phage vector and then sequenced respectively.

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We have found that the SacII-EcoRI fragment in the nontranscribed spacer (NTS) of silkworm Attacus ricini rDNA is a nuclear scaffold-associated region (SRA) and showed the function as the ARS element in yeast. This paper reports the sequence of this NTS region and the various characteristic potential functional motifs as analyzed by computer. It is 1 025 bp long and AT-Rich.

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