Publications by authors named "Yuya Miyahara"

In this study, we conducted a collaborative study on the classification between silicone oil droplets and protein particles detected using the flow imaging (FI) method toward proposing a standardized classifier/model. We compared four approaches, including a classification filter composed of particle characteristic parameters, principal component analysis, decision tree, and convolutional neural network in the performance of the developed classifier/model. Finally, the points to be considered were summarized for measurement using the FI method, and for establishing the classifier/model using machine learning to differentiate silicone oil droplets and protein particles.

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We oxidized histidine residues in monoclonal antibody drugs of immunoglobulin gamma 1 (IgG1) using ultraviolet C irradiation (UVC: 200-280 nm), which is known to be potent for sterilization or disinfection. Among the reaction products, we identified asparagine and aspartic acid by mass spectrometry. In the photo-induced oxidation of histidine in angiotensin II, O atoms from HO in the solvent were incorporated only into aspartic acid but not into asparagine.

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Eukaryotic structural maintenance of chromosome proteins (SMC) are major components of cohesin and condensins that regulate chromosome structure and dynamics during cell cycle. We here determine the crystal structure of human condensin SMC hinge heterodimer with ~30 residues of coiled coils. The structure, in conjunction with the hydrogen exchange mass spectrometry analyses, revealed the structural basis for the specific heterodimer formation of eukaryotic SMC and that the coiled coils from two different hinges protrude in the same direction, providing a unique binding surface conducive for binding to single-stranded DNA.

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The gamma-Ga(2)O(3)-Al(2)O(3) mixed oxides with a spinel structure were prepared by the solvothermal reaction of gallium acetylacetonate and aluminum isopropoxide in diethylenetriamine. In the crystal structures of the catalysts obtained by the calcination of these mixed oxides, Ga(3+) and Al(3+) ions preferentially occupied tetrahedral and octahedral sites, respectively. The catalysts with low Ga contents had a unique structure with high surface areas and a concentration gradient of decreasing Ga content from the surface to the bulk.

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