Publications by authors named "Yuri Novozhilov"

We describe a new species, (Myxomycetes), collected from a microhabitat new for myxomycetes: stem wounds of coniferous trees (Norway spruce) where the resin is overgrown with a community of resinicolous fungi. The 80 known collections come from the Vosges (France), the Black Forest (Germany), Swabian Alp (Germany), and several localities in Denmark and Norway. Observations, but as well as metabarcoding of substrate samples with fungal (ITS [internal transcribed spacer]), bacterial (16S rDNA), and myxomycete (18S nuc rDNA) primers from eight trunks, revealed the new myxomycete to co-occur with resin-degrading ascomycetes ().

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The nivicolous species of the genus Diderma are challenging to identify, and there are several competing views on their delimitation. We analyzed 102 accessions of nivicolous Diderma spp. that were sequenced for two or three unlinked genes to determine which of the current taxonomic treatments is better supported by molecular species delimitation methods.

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A new species of (), described herein as , was recovered in the field on ground litter from mountain subtropical forests (Phia Oắc - Phia Đén National Park) of northern Vietnam. Morphological details were examined by light and scanning electron microscopy. The species is characterized by a distinct and unique combination of morphological features, including a bright blue, shiny and very thin membranous peridium, a small dome-shaped columella, rigid, straight, branched, brown capillitial threads which gradually become pale at the periphery and finally colorless at the tips and small-meshed, banded-reticulate spores with 9-12 meshes across the spore diameter and solid walls without perforations 0.

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Article Synopsis
  • - The study investigates the genetic diversity and distribution of the myxomycete species Physarum albescens across the Northern Hemisphere, analyzing 324 samples using various genetic markers.
  • - The findings reveal at least 18 distinct cryptic species within P. albescens, with some being regionally endemic and not found in other areas, indicating a complex structure within this seemingly cosmopolitan group.
  • - Additionally, the research shows evidence of both sexual and asexual reproduction in these myxomycetes, highlighting their ability to adapt and survive in diverse environments.
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The genus is resurrected on the basis of comparative morphology and phylogeny of partial nuc 18S rDNA (18S) and translation elongation factor 1-alpha () nucleotide sequences. The genus is characterized by the firm upper surface of the pseudoaethalium, accreted but easily separable sporothecae, a tubular or fibrous columella, and spores with a reticulate ornamentation consisting of 7-9 meshes across the diameter. In addition to the currently known single species (= ), two new members of are described: from coniferous forests of Europe, east Asia, and southeast Asia, and from temperate and subarctic regions of North America and alpine regions of Europe.

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Among soil-inhabiting protists, myxomycetes stand out by their macroscopic fructifications which have allowed studies on their ecology and distribution for more than two hundred years. One of the most distinct ecological guilds in myxomycetes are the nivicolous or "snowbank" myxomycete species, which produce fruit bodies at the edge of melting snowbanks in spring. Relationship between the occurrence of fructifications and myxamoebae remain unknown.

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Article Synopsis
  • Two proposals have been put forward to allow DNA sequences to be used as types for naming certain fungi, which could fundamentally alter the definition of nomenclatural types and lead to various issues in scientific reproducibility and nomenclatural instability.
  • The authors argue against these proposals, suggesting that they would not effectively address the challenges of naming taxa based solely on DNA and propose instead that formulas for naming candidate taxa could be a better solution without changing existing nomenclature rules.
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Article Synopsis
  • - Unicellular eukaryotic organisms known as protists are crucial predators in soil ecosystems, but their classification is complex due to their diverse evolutionary backgrounds, making it hard to use a single identifier (or barcode) for them.
  • - This study focuses on plasmodial slime moulds, a type of protist that can form distinct fruit bodies, enabling better species identification and the creation of the largest database of dark-spored myxomycetes through Sanger sequencing.
  • - The researchers propose a new threshold (99.1% similarity) for distinguishing species in environmental studies, revealing a hidden diversity of potential species that significantly surpasses those that have been previously described, with many remaining unidentified based on existing databases.
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Myxomycetes (plasmodial slime molds, Amoebozoa) are often perceived as widely distributed, confounding to the "everything is everywhere" hypothesis. To test if gene flow within these spore-dispersed protists is restricted by geographical barriers, we chose the widespread but morphologically unmistakable species Hemitrichia serpula for a phylogeographic study. Partial sequences from nuclear ribosomal RNA genes (SSU) revealed 40 ribotypes among 135 specimens, belonging to three major clades.

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Specimens of the snowbank myxomycete Meriderma atrosporum agg. from five European mountain ranges were sequenced for parts of the nuclear small subunit ribosomal RNA gene (SSU) and the protein elongation factor 1 alpha gene (EF1A). A phylogeny of the EF1A gene, including a very variable spliceosomal intron, resulted in seven phylogroups, and this topology was confirmed by SSU sequences.

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Rationale: Data on the bulk stable isotope composition of soil bacteria and bacterivorous soil animals are required to estimate the nutrient and energy fluxes via bacterial channels within detrital food webs. We measured the isotopic composition of slime molds (Myxogastria, Amoebozoa), a group of soil protozoans forming macroscopic spore-bearing fruiting bodies. An analysis of largely bacterivorous slime molds can provide information on the bulk stable isotope composition of soil bacteria.

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Background: If literature protocols are followed, conversion of an advanced ketal ester intermediate (available in kilogram quantities via a published Paal-Knorr synthesis) to cholesterol-lowering drug atorvastatin calcium is hampered by several process issues, particularly at the final stage where the hemi-calcium salt is obtained.

Results: We developed a high-yielding synthesis of atorvastatin calcium salt on 7 kg scale that affords >99.5% product purities by introducing the following key improvements: i.

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A new species of Perichaena, described herein as P. echinolophospora, was isolated in moist chamber cultures from substrate samples collected in the monsoon deciduous lowland tropical forests (Cat Tien National Park, Vinh Cuu Nature Reserve) and mixed montane tropical forests (Bi Dup-Nui Ba Nature Reserve) of southern Vietnam. Perichaena echinolophospora was recovered from ground litter, aerial litter and the bark of living trees.

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A new widespread myxomycete species, Physarum pseudonotabile, inhabiting the arid regions of the Eurasia, South and North America is described and illustrated. Tentatively assigned to Ph. notabile T.

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A new species of Trichia (myxomycetes) was collected during surveys for myxomycetes carried out in Nothofagus cunninghamii forests in western Tasmania in May 2008 and a similar survey carried out in a N. morrei forest in New South Wales in May 2009. This new species, T.

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Plasmodial slime molds (Myxogastria or Myxomycetes) are common and widespread unicellular organisms that are commonly assumed to have a sexual life cycle culminating with the formation of often macroscopic fruiting bodies that efficiently disseminate spores. However, laboratory studies based on mating compatibility revealed the coexistence of asexual as well as sexual strains. To test this hypothesis in natural populations, we investigated the genetic variability of two species of the genus Lamproderma.

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Two new myxomycete species from dry steppe and desert communities of the Caspian Lowland (Russia) and central Kazakhstan are described and illustrated. They are placed tentatively within genus Perichaena, which does include species with a reduced capillitium and single-layered peridium. Both species were found repeatedly in moist chamber cultures; P.

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