Publications by authors named "Yuqi Chen"

The spatial structure of cells is highly organized at multiscale levels from global spatial domains to local cell type heterogeneity. Existing methods for analyzing spatially resolved transcriptomics (SRT) are separately designed for either domain alignment across multiple slices or deconvoluting cell type compositions within a single slice. To this end, a novel deep learning method, SMILE, is proposed which combines graph contrastive autoencoder and multilayer perceptron with local constraints to learn multiscale and informative spot representations.

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Hepatic ischemia-reperfusion injury (HIRI) is an essential clinical concern caused by liver transplantation, resection, trauma, and shock that must be addressed immediately. Although the mechanisms underlying HIRI are well-documented, effective prevention and treatment strategies are still lacking. Inflammation is a central mechanism of HIRI, with macrophages playing a crucial role in initiating and amplifying the inflammatory response.

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Background: Para-phenylenediamine (PPD) is a crystalline solid that belongs to the aromatic amine group, widely used in the manufacturing of various dyes. PPD exhibits toxic effects on female hormone stability, ovarian function, and embryo development. Although studies have shown that PPD exposure can damage oocyte quality in female mice, research on its effects on male reproductive capability, particularly on human sperm quality and function, is limited.

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Obtaining effective extreme ultraviolet lithography (EUVL) materials for pragmatic applications remains challenging. The experimental design and conventional theoretical prediction are time-consuming and costly and hardly affordable to accelerate the discovery of commercial EUVL materials. In this work, we employed the machine learning (ML) technique to predict the ionization potential of promising EUVL materials, which is closely related to the photoresists' solubility switch.

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Brain effective connectivity (EC) is a functional measurement that reflects the causal effects and topological relationships of neural activities. Recent research has increasingly focused on the classification for mental illnesses and healthy controls using brain EC; however, no comprehensive reviews have synthesized these studies. Therefore, the aim of this review is to thoroughly examine the existing literature on constructing diagnosis model for mental illnesses using brain EC.

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Background: Acute kidney injury (AKI) is a clinically complex syndrome with a high incidence and mortality rate in the intensive care unit (ICU). Early identification of high-risk patients and timely intervention are crucial.

Objective: A local database was used to construct a model that predicts the incidence of AKI in ICU patients within 48 hours.

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Gossip is ubiquitous. People gossip for several reasons. Beyond well-studied explanations, we propose an underexplored reason: tellers overestimate the extent to which gossiping encourages listeners' self-disclosure.

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Article Synopsis
  • Hashimoto's thyroiditis (HT) is an autoimmune disorder with unknown molecular mechanisms, prompting a study to explore gut metagenome and host transcriptome interactions to better understand the disease.
  • The research involved 31 early HT patients and 30 healthy controls, analyzing blood and fecal samples through advanced sequencing and integrative analysis techniques to identify molecular signatures associated with HT.
  • Findings revealed changes in gut microbiota diversity, identified specific bacteria and RNA molecules linked to HT, and highlighted alterations in immune-related pathways, suggesting complex interactions between gut health and thyroid function in the disease.
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Integrated electro-optic (EO) modulators are the core components of the optoelectronic information technology, and lithium niobate is currently the most widely used crystalline thin film material; however, finite EO coefficients limit the modulation efficiency of the modulators. In this Letter, we present an integrated EO modulator using a microring resonator on the lead zirconate titanate (PZT) and silicon nitride (SiN) heterogeneous platform. The microwave attenuation is reduced by using low loss tangent and dielectric constant SiN as the electrode substrate, achieving an EO bandwidth of 33 GHz.

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Macroscale functional gradient techniques provide a continuous coordinate system that extends from unimodal regions to transmodal higher-order networks. However, the alterations of these functional gradients in AD and their correlations with cognitive terms and gene expression profiles remain to be established. In the present study, we directly studied the functional gradients with functional MRI data from seven scanners.

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The TiSiCTiSi ceramic composite was synthesized in situ from a mixture of 3Ti:1.5Si:1.2C powders under pressures ranging from 2 to 5 GPa and temperatures of 1150 °C to 1400 °C.

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  • The study examines how brain networks change with aging and neurodegenerative diseases, using MRI data from over 7,300 participants to identify unique patterns related to conditions like Alzheimer's disease (AD).
  • Gene analysis revealed that normal aging involves significant transport of inorganic ions, while different neurodegenerative diseases share a focus on chemical synaptic transmission.
  • Findings highlight that each disorder presents specific neurophysiological issues, helping to clarify the biological mechanisms behind AD compared to normal aging and other disorders.
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  • Antimony (Sb) exposure has a negative impact on female reproduction, leading to reduced quality of oocytes and failure in fertilization.
  • The study involved exposing ICR mice to varying doses of Sb and observing significant damage to oocyte maturation, particularly affecting the cytoskeleton and mitochondrial function.
  • The findings indicate that Sb leads to oxidative stress and early apoptosis in oocytes, ultimately compromising female fertility by impairing energy supply and mitochondrial health.
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  • Selective C-H activation in organic chemistry aims to modify complex molecules, including important biological ones, under mild conditions.
  • 5-Methylcytosine (5mC) is crucial in DNA as an epigenetic marker that can provide insights into biological processes.
  • The study successfully demonstrates a method for selectively oxidizing 5mC to 5-formylcytosine (5fC) using photocatalysis, paving the way for improved DNA methylation analysis and advanced sequencing techniques.
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Oocyte aging is a key constraint on oocyte quality, leading to fertilization failure and abnormal embryonic development. In addition, it is likely to generate unfavorable assisted reproductive technology (ART) outcomes. SCM-198, a synthetic form of leonurine, was found to rescue the rate of oocyte fragmentation caused by postovulatory aging.

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The floor constitutes one of the largest areas within a building with which users interact most frequently in daily activities. Employing floor sensors is vital for smart-building digital twins, wherein triboelectric nanogenerators demonstrate wide application potential due to their good performance and self-powering characteristics. However, their sensing stability, reliability, and multimodality require further enhancement to meet the rapidly evolving demands.

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Background: Acupuncture (AT) is widely used in treatment of ovulatory disorder infertility (ODI), but the safety and efficacy of AT for ODI still lack an evidence-based basis.

Aim: To evaluate the feasibility and effectiveness of AT as an adjunct intervention for ODI.

Methods: The Cochrane Library, Embase, PubMed, VIP, China National Knowledge Infrastructure, WanFang Data, and Chinese biomedical literature databases were searched from inception to January 20, 2024.

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In this work, two tin(II)-based sulfates, SnOSO and SnO(OH)(HSO), were synthesized via the mild hydrothermal method. Both compounds employ the Sn cation with stereochemically active lone pair (SCALP) electrons and non-π-conjugated tetrahedral anionic groups SO as the functional structural blocks. Interestingly, the experimental birefringence of SnO(OH)(HSO) is 0.

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Drug-target interactions underlie the actions of chemical substances in medicine. Moreover, drug repurposing can expand use profiles while reducing costs and development time by exploiting potential multi-functional pharmacological properties based upon additional target interactions. Nonetheless, drug repurposing relies on the accurate identification and validation of drug-target interactions (DTIs).

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Objectives: To clarify if the mechanism of Sanliangsan in improving Sjogren's syndrome complicated with interstitial lung disease (SS-ILD) involves MUC1 suppression, which is involved in SS-ILD pathogenesis.

Methods: Fifty-six patients were randomly divided into two groups receiving Sanliangsan prescription (SP) therapy and conventional therapy (western medicine). In-depth transcriptome profiles from a large database of SS-ILD patients were collected and analyzed to identify candidate genes involved in SS pathogenesis.

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Aims: Gastric cancer (GC) is one of the most common malignant tumors of the digestive system. High expression of the mitotic kinase BUB1 has been shown to be associated with the development of many cancers, but the role of BUB1 in GC is still unclear. The current study aimed to investigate the role of BUB1 in GC.

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Background: Depression is a common psychological problem in adolescents worldwide. Although the World Health Organization recommends that members of this population engage in physical activity to reduce depressive symptoms, compliance with this recommendation is often low. Furthermore, although behavioral activation (BA) is recommended as a treatment for adolescents with depression, the reported effect size is small.

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  • Preeclampsia is a severe pregnancy-related condition with no effective prevention methods, and recent studies suggest transcutaneous auricular vagus nerve stimulation (taVNS) might help.
  • This study found that taVNS can reduce the apoptosis (cell death) of placental cells by promoting the release of acetylcholine, which inhibits harmful mitochondrial reactive oxygen species (mtROS).
  • By minimizing cell death and preserving mitochondrial health, taVNS could improve placental function and offer new therapeutic strategies for managing preeclampsia.
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Background: Less. is a perennial herb belonging to the Compositae family that has been used in traditional medicine as an antitussive and expectorant for treating chronic bronchitis and acute respiratory infections. Traditionally, Feining Granules are prepared from water extracts of the raw plant material.

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The performance of zinc-air battery is constrained by the sluggish rate of oxygen electrode reaction, particularly under high current discharge conditions where the kinetic process of the oxygen reduction reaction (ORR) decelerates significantly. To address this challenge, we present a novel phase transition strategy that facilitates the creation of a heteroatom-doped heterointerface (CoN/CoS). The meticulously engineered CoN/CoS/NC electrocatalyst displays a superior ORR half-wave potential of 0.

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