Publications by authors named "Yunjia Hu"

Article Synopsis
  • The study explored macrophage subpopulations in subarachnoid haemorrhage (SAH) using rat models, single-cell transcriptome sequencing, and bulk RNA-seq to identify important genes for diagnosis and treatment.
  • Researchers discovered distinct macrophage subpopulations and highlighted 160 key genes related to macrophages, ultimately narrowing it down to 10 genes for a diagnostic model with high performance metrics.
  • Additionally, the study identified specific potential therapeutic targets and drugs, emphasizing the need for further experiments and clinical investigations to validate these findings and their implications in SAH treatment.
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Coronavirus disease 2019 (COVID-19), which is caused by the novel coronavirus severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is the most severe emerging infectious disease in the current century. The discovery of SARS-CoV-2-related coronaviruses (SARSr-CoV-2) in bats and pangolins in South Asian countries indicates that SARS-CoV-2 likely originated from wildlife. To date, two SARSr-CoV-2 strains have been isolated from pangolins seized in Guangxi and Guangdong by the customs agency of China, respectively.

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The presence of a novel functional prophage, IME1365_01, was predicted from bacterial high-throughput sequencing data and then successfully induced from Staphylococcus haemolyticus by mitomycin C treatment. Transmission electron microscopy showed that phage IME1365_01 has an icosahedral head (43 nm in diameter) and a long tail (172 nm long). This phage possesses a double-stranded DNA genome of 44,875 bp with a G+C content of 35.

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Previous studies have identified multiple viruses in dead or severely diseased pangolins, but descriptions of the virome in healthy pangolins are lacking. This poses a greater risk of cross-species transmission due to poor preventive awareness and frequent interactions with breeders. In this study, we investigated the viral composition of 34 pangolins with no signs of disease at the time of sampling and characterized a large number of arthropod-associated viruses belonging to 11 families and vertebrate viruses belonging to eight families, including those with pathogenic potential in humans and animals.

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Temperate phages (active prophages induced from bacteria) help control pathogenicity, modulate community structure, and maintain gut homeostasis. Complete phage genome sequences are indispensable for understanding phage biology. Traditional plaque techniques are inapplicable to temperate phages due to their lysogenicity, curbing their identification and characterization.

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Article Synopsis
  • - Foodborne diseases are increasingly problematic due to drug-resistant bacteria, particularly with Vibrio parahaemolyticus, necessitating new control strategies.
  • - A specific lytic bacteriophage called vB_VpS_PG28 was isolated from sewage in a seafood market, showing a high capacity to kill bacteria and a genetic structure similar to other phages in the Siphoviridae family.
  • - The study suggests vB_VpS_PG28 could be a beneficial agent against foodborne pathogens, but emphasizes the need for oral toxicity testing to ensure safety before use.
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We report the complete genome sequence of Aeromonas hydrophila bacteriophage BUCT552 whose full length of the linear dsDNA genome is 59,685 bp and G+C content is 60.0%. It contains 74 open reading frames but no tRNA.

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Since the first reported case caused by the novel coronavirus SARS-CoV-2 infection in Wuhan, COVID-19 has caused serious deaths and an ongoing global pandemic, and it is still raging in more than 200 countries and regions around the world and many new variants have appeared in the process of continuous transmission. In the early stage of the epidemic prevention and control and clinical treatment, traditional Chinese medicine played a huge role in China. Here, we screened out six monomer compounds, including artemether, artesunate, arteannuin B, echinatin, licochalcone B and andrographolide, with excellent anti-SARS-CoV-2 and anti-GX_P2V activity from Anti-COVID-19 Traditional Chinese Medicine Compound Library containing 389 monomer compounds extracted from traditional Chinese medicine prescriptions "three formulas and three drugs".

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In this study, a novel Escherichia coli-specific bacteriophage, vB_EcoM_IME392, was isolated from chicken farm sewage in Qingdao, China. The genome of IME392 was found by next-generation sequencing to be 116,460 base pairs in length with a G+C content of 45.4% (GenBank accession number MH719082).

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Article Synopsis
  • Researchers isolated a new phage, BUCT549, from seafood market sewage, which shows promise for phage therapy due to its ability to thrive in extreme pH levels and high temperatures.
  • The study proposes classifying BUCT549 as a new genus based on genetic similarities and its connections to other phages affecting different bacterial species.
  • Findings indicate that certain bacteria can evolve to evade phage attacks by mutating their membrane protein genes, suggesting a need for ongoing research into phage-bacteria interactions for effective biological control strategies.
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Stenotrophomonas maltophilia is a common conditional pathogen, and it is naturally resistant to most commonly used clinical antibiotics. The bacteriophage is considered to be a potential antibiotic alternative for treating multi-drug-resistant bacteria. In this study, a bacteriophage BUCT555 was isolated from hospital sewage for lysing the clinical multi-drug resistant Stenotrophomonas maltophilia.

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Stenotrophomonas maltophilia (hereinafter referred to as S. maltophilia) has developed into an important opportunistic pathogenic bacterium, which is prevalent in nosocomial and community infections, and has adverse effects on patients with a compromised immune system. Phage vB_SmaS_BUCT548 was isolated from sewage of Beijing 307 Hospital with S.

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