Lamin B1, a crucial component of the nuclear lamina, plays a pivotal role in chromatin organization and transcriptional regulation in eukaryotic cells. While recent studies have highlighted the connection between Lamin B1 and RNA splicing regulation, the precise molecular mechanisms remain elusive. In this study, we demonstrate that Lamin B1 depletion leads to a global reduction in splicing factor expression, as evidenced by analysis of multiple RNA-seq datasets.
View Article and Find Full Text PDFThis study aimed to profile metabolites from five Trichoderma strains and assess their cytotoxic and pharmacological activities, particularly targeting oral squamous cell carcinoma (OSCC). UHPLC-TOF-MS analysis revealed the presence of 25 compounds, including heptelidic acid, viridiol isomers, and sorbicillinol from the different Trichoderma extracts. Pharmacokinetic analysis showed moderate permeability and low interaction with P-glycoprotein, suggesting good drug absorption with minimal interference in cellular uptake.
View Article and Find Full Text PDFBackground: Propylparaben (PrP) is commonly used as an antimicrobial agent in food, cosmetics, and pharmaceuticals. While recent studies have shown that PrP exposure can cause various disruptions in cellular physiology, the precise mechanisms behind these effects remain unclear.
Objective: In this study, we sought to examine the cytotoxic effects of PrP exposure on human lung cells in a dose- and time-dependent manner.
Background: Bisphenols are prevalent in food, plastics, consumer goods, and industrial products. Bisphenol A (BPA) and its substitutes, bisphenol F (BPF) and bisphenol S (BPS), are known to act as estrogen mimics, leading to reproductive disorders, disruptions in fat metabolism, and abnormalities in brain development.
Objectives: Despite numerous studies exploring the adverse effects of bisphenols both and , the molecular mechanisms by which these compounds affect lung cells remain poorly understood.
Histone H3K9 methylated heterochromatin silences repetitive non-coding sequences and lineage-specific genes during development, but how tissue-specific genes escape from heterochromatin in differentiated cells is unclear. Here, we examine age-dependent transcriptomic profiling of terminally differentiated mouse retina to identify epigenetic regulators involved in heterochromatin reorganization. The single-cell RNA sequencing analysis reveals a gradual downregulation of in cone photoreceptors during aging.
View Article and Find Full Text PDFA novel Gram-stain-negative, aerobic, rod-shaped, non-motile, cream-coloured strain (G124) was isolated from ginseng soil collected in Yeongju, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain G124 belongs to a distinct lineage within the genus (family , order and class ). Strain G124 was closely related to THG-T61 (98.
View Article and Find Full Text PDFTwo strains, YP344 and YP579 were isolated from soil samples in Pocheon City, Gyeonggi Province, South Korea. The strains YP344 and YP579 belong to the genus and , respectively. The molecular phylogenetic analysis showed that the strain YP344 was closely related to Strain YP344 differed by four nucleotide substitutions with no gap (0.
View Article and Find Full Text PDFTwo novel Gram-stain-negative, aerobic, rod shaped bacterial strains BT290 and BT689 were isolated from soil collected in South Korea. Colony morphologies of both strains were circular and convex while the colors of BT290 and BT689 were light-pink and white, respectively. Phylogenetic analysis based on 16S rRNA gene sequences revealed that BT290 and BT689 belong to a distinct lineage within the genus Microvirga (family Methylobacteriaceae, order Rhizobiales, class Alphaproteobacteria, phylum Proteobacteria, kingdom Bacteria).
View Article and Find Full Text PDFA bacterial strain designated as G188 was isolated from ginseng field soil in the Republic of Korea. Phylogenetic analysis of 16S rRNA gene sequences showed that strain G188 formed a distinct lineage within the genus family , order . Sequence similarity revealed that strain G188 was most closely related to IR27-S3 (97.
View Article and Find Full Text PDFTwo bacterial strains, BT325 and BT690, were isolated from soil samples collected in Korea. Both strains were Gram stain-negative, short rod-shaped, and formed light-pink colored colonies. The 16S rRNA sequence similarity of strains BT325 and BT690 shared a sequence similarity of 99.
View Article and Find Full Text PDFA novel Gram-stain-negative, aerobic, rod-shaped, convex, and light pink-colored strain BT688 was isolated from a soil sample collected in Jeongseon City, South Korea. Phylogenetic analysis based on 16S rRNA gene sequence revealed that strain BT688 belongs to a distinct lineage within the genus Microvirga (family Methylobacteriaceae, order Rhizobiales, class Alphaproteobacteria, phylum Proteobacteria). The 16S rRNA gene sequence similarity between strain BT688 and Microvirga aerilata 5420S-16 was 98.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
March 2022
Two bacterial strains, designated BT189 and BT664, were isolated from soil sampled in the Republic of Korea. Phylogenetic analysis based on the 16S rRNA gene sequences showed that strains BT189 and BT664 belonged to the genus , family (order ). The 16S rRNA genes of the two strains shared a sequence similarity of 93.
View Article and Find Full Text PDFDespite favorable responses to initial chemotherapy, drug resistance is a major cause limiting chemotherapeutic efficacy in many advanced cancers. However, mechanisms that drive drug-specific resistance in chemotherapy for patients with advanced cancers are still unclear. Here, we report a unique role of death-associated protein kinase-related apoptosis-inducing kinase 1 (DRAK1) associated with paclitaxel resistance in cervical cancer cells.
View Article and Find Full Text PDFA Gram-negative, short rod-shaped, and pink-pigmented bacterial strain, designated MA1, was isolated from a soil sample from Gijang-gun, Busan in Republic of Korea. The 16S rRNA gene sequence analysis showed that strain MA1 belonged to the genus Larkinella and was closely related to "Larkinella punicea" (97.5% similarity), Larkinella rosea 15J16-1T3A (96.
View Article and Find Full Text PDFTwo novel bacterial strains, designated as BT186 and BT505, were isolated from a soil sample collected in South Korea and characterized. Both strains were Gram-stain-negative, rod-shaped, aerobic, circular, convex, and had red-colored colonies. The level of 16S rRNA gene sequence similarity between the strains BT186 and BT505 was 100%, indicating that they represent an identical species.
View Article and Find Full Text PDFThree strains, YP416, YP421 and Y422, were isolated from soil samples in Pocheon City, Gyeonggi province, South Korea. The strains belong to two novel yeast species in the genus . Molecular phylogenetic analysis showed that the strain YP416 was closely related to .
View Article and Find Full Text PDFAntonie Van Leeuwenhoek
October 2021
Two novel Gram-negative bacterial strains BT190 and BT191 were isolated from soil collected in Uijeongbu city (37°44'55″N, 127°02'20″E), Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains BT190 and BT191 belong to a distinct lineage within the genus Hymenobacter (family Hymenobacteraceae, order Cytophagales, class Cytophagia). The level of 16S rRNA gene sequence similarity between the strains BT190 and BT190 was 99.
View Article and Find Full Text PDFThis paper presents a new type of switchable liquid shutter for the security and design of mobile electronic devices. The operation test of the liquid shutter is conducted using a prototype sample prepared by standard microfabrication processes. The liquid shutter consists of an opaque liquid for absorbing light and a transparent oil for transmitting light on two parallel plates with patterned indium titanium oxide electrodes.
View Article and Find Full Text PDFThe cumulative knowledge of retina development has been instrumental in the generation of retinal organoid systems from pluripotent stem cells; and these three-dimensional organoid models, in turn, have provided unprecedented opportunities for retinal research and translational applications, including the ability to model disease in a human setting and to apply these models to the development and validation of therapeutic drugs. In this review article, we examine how retinal organoids can also contribute to our understanding of retinal developmental mechanisms, how this knowledge can be applied to modeling developmental abnormalities, and highlight some of the avenues that remain to be explored.
View Article and Find Full Text PDFTwo novel Gram-negative, rod-shaped bacterial strains BT702 and BT704 were isolated from soil collected in Jeongseon (37° 22' 45″ N, 128° 39' 53″ E), Gangwon province, South Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains BT702 and BT704 belong to distinct lineage within the genus Spirosoma (family Cytophagaceae, order Cytophagales, class Cytophagia and phylum Bacteroidetes). The strain BT702 was closely related to Spirosoma flavus 15J11-2 (96.
View Article and Find Full Text PDFTwo novel Gram-negative bacterial strains, BT507 and BT506, were isolated from soil collected in Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that both strains BT507 and BT506 belong to a distinct lineage within the genus Hymenobacter (family Hymenobacteraceae; order Cytophagales; class Cytophagia). The 16S rRNA genes of the two strains shared a sequence similarity of 100.
View Article and Find Full Text PDFA novel Gram-negative bacterial strain BT320 was isolated from soil collected in Uijeongbu city, Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain BT320 belong to a distinct lineage within the genus Flavisolibacter (family Chitinophagaceae, order Chitinophagales, class Chitinophagia). The strain BT320 was closely related to Flavisolibacter galbus 17J28-26 (97.
View Article and Find Full Text PDFA bacterial strain, BT25, was isolated from soil in Korea. The bacterial cells were Gram-negative and rod-shaped. Phylogenetic analysis using 16S rRNA gene sequences showed that the BT25 strain was related to the genus Phyllobacterium.
View Article and Find Full Text PDFA newly isolated bacterial strain designated as HKS19 was isolated from a ginseng cultivation soil sample collected in South Korea. Cells of the strain HKS19 were Gram-stain-negative, rod, oval-shaped and they formed yellow colonies when grown on R2A agar at 30 °C. HKS19 showed the highest 16S rRNA gene sequence similarity (98.
View Article and Find Full Text PDF