Publications by authors named "Yumi Iwadate"

Polyamines are organic cations that are important in all domains of life. Here, we show that in Salmonella, polyamine levels and Mg levels are coordinately regulated and that this regulation is critical for viability under both low and high concentrations of polyamines. Upon Mg starvation, polyamine synthesis is induced, as is the production of the high-affinity Mg transporters MgtA and MgtB.

View Article and Find Full Text PDF
Article Synopsis
  • Salmonella and E. coli regulate levels of polyamines like cadaverine and putrescine for pH balance and cell survival; too much or too little can be harmful.
  • The inner membrane protein PaeA is crucial for lowering the concentrations of these polyamines in the cytoplasm, particularly during acidic growth conditions.
  • Without PaeA, these bacteria struggle with high polyamine levels, leading to reduced viability, but overexpression of the protein or known exporters can help alleviate this issue.
View Article and Find Full Text PDF

Purine is a nitrogen-containing compound that is abundant in nature. In organisms that utilize purine as a nitrogen source, purine is converted to uric acid, which is then converted to allantoin. Allantoin is then converted to ammonia.

View Article and Find Full Text PDF

The Escherichia coli PhoB-PhoR two-component system responds to phosphate starvation and induces the expression of many genes. Previous studies suggested that phosphate starvation induces oxidative stress, but the involvement of the PhoB regulon in oxidative stress tolerance has not been clarified. Here, we showed that ytfK, one of the PhoB regulon genes, is involved in cell tolerance to a redox-cycling drug, menadione, and H2O2 in stationary-phase cells.

View Article and Find Full Text PDF

Previously, we constructed a series of reduced-genome strains of Escherichia coli by combining large-scale chromosome deletions and then tested the sensitivity of these strains to the redox-cycling drug menadione. In this study, we analyzed a deletion that increased menadione sensitivity and discovered that loss of selenocysteine synthase genes was responsible for the strain's reduced tolerance to oxidative stress. Mutants of formate dehydrogenases, which are selenocysteine-containing enzymes, were also sensitive to menadione, indicating that these enzymes are involved in oxidative stress during stationary phase, specifically under microaerobic conditions in the presence of glucose.

View Article and Find Full Text PDF

The construction of engineered bacterial cells with a reduced genome allows the investigation of molecular mechanisms that may be cryptic in wild-type strains and derivatives. Previously, a large-scale combined deletion mutant of Escherichia coli that lacked 29.7% of the parental chromosome was constructed by combining large chromosome deletions.

View Article and Find Full Text PDF