Publications by authors named "Yu-guang Zhou"

Article Synopsis
  • Five new aerobic, Gram-negative bacterial strains were isolated from coastal soil at LungmuCo Lake in Tibet and are proposed as novel species based on genetic analyses.
  • Phylogenetic and genetic comparisons indicated these strains had high similarity to existing strains but were below the species delineation threshold.
  • Key characteristics included a unique genomic DNA G+C content, specific major polar lipids, and predominant fatty acids, leading to the proposal of the new species name for the strains, with C3-2-a3 identified as the type strain.
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  • 'Haloarcula aidinensis' was first described by a Chinese scientist and has recently been reclassified based on advanced genomic analyses, linking it to 'Haloarcula amylolytica'.
  • Three new halophilic archaeal strains (CK38, DT43, and SYNS111) were isolated from saline environments in China and classified as new species of Haloarcula.
  • The strains have distinct phenotypic traits and specific phospholipid profiles, leading to the proposal of new species names: Haloarcula sediminis, Haloarcula brevis, and Haloarcula regularis.
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  • A novel bacterial strain, C22-A2, was isolated from Lake LungmuCo in Tibet, characterized as long rod-shaped, Gram-negative, and capable of growth in specific temperature and salinity conditions.
  • Phylogenetic analysis revealed that C22-A2 is related to the genus but distinct enough to be considered a new species, showing high similarity to DSM 10037, yet significant genetic differences from related species.
  • Genome analysis identified genes in C22-A2 that help it withstand osmotic and oxidative stress, alongside shared biochemical traits, leading to its classification as a new species of the genus, officially named sp. nov.
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Two Gram-positive, rod-shaped, endospore-forming strains, YIM B05601 and YIM B05602, were isolated from soil sampled at Hamazui hot spring, Tengchong City, Yunnan Province, PR China. Phylogenetic analysis based on 16S rRNA gene sequences suggested that the two strains fell within the genus , appearing most closely related to YIM B00362 (96.9 % sequence similarity).

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Five aerobic, Gram-stain-negative, non-motile, non-spore-forming, short rod bacteria strains, designated as C3-1-R+6, C3-2-M9, B3-2-R-7, B3-2-R-21 and C3-2-M2, were isolated from shore soil of LungmuCo Lake in Tibet of China. The 16S rRNA gene sequence comparisons confirmed their affiliation to the genus of the family , and showed that they were most closely related to KACC 18788 with 94.26 % similarities.

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  • Two new strains of bacteria, XJ19-10 and XJ19-11, were discovered in river water in Xinjiang, China, showing specific traits like being Gram-stain-negative and strictly aerobic.
  • These strains are closely related to a known bacterium (Z0201) but are considered a novel species due to significant differences in genetic analysis.
  • The study identified various biochemical characteristics, such as major polar lipids and fatty acids, and proposed the new species name while designating XJ19-10 as the type strain.
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Two novel strains, designated XJ19-45 and XJ19-1, were isolated from water of Kuche River in Xinjiang Uygur Autonomous Region, China. Their cells were Gram-stain-negative, aerobic and motile rods. The phylogenetic analyses based on 16S rRNA genes and genomes showed that the two isolates belonged to the genus and the closest relative was HST3-14.

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A bacterial strain, Gram staining negative, aerobic, long rod, motile bacterium with flagellum, designated strain YIM 98829, was isolated from the Aiding Lake in Xinjiang province, North-West China. The isolate produced oval subterminal endospores in swollen sporangia. The predominant menaquinone was MK-7.

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A Gram-stain-negative, aerobic, flagellated, non-spore-forming, rod-shaped bacterium, named B2R-29, was isolated from water collected from a crater lake on Da Hinggan mountain, PR China. Strain B2R-29 was oxidase- and catalase-positive. On the basis of the results of 16S rRNA gene sequence analyses, strain B2R-29 clearly belonged to the family , class and showed the highest similarity to EM1 (97.

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Two nitrogen-fixing and heavy oil degrading strains, designated RWY-5-1-1 and ROY-1-1-2, were isolated from an oil production mixture from Yumen Oilfield in China. The 16S rRNA gene sequence showed they belong to Azospirillum and have less than 96.1 % pairwise similarity with each species in this genus.

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is a monophyletic genus containing seven sections. The number of species in grows rapidly due to reliable and complete sequence data contributed from all over the world. In this study agricultural soil samples from Fujiang, Guangdong, Jiangxi, Shandong, Tibet and Zhejiang provinces of China were collected and analyzed for fungal diversity.

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Two bacterial strains, designated B2N2-7 and B2N2-12, were isolated from Buteha crater lake in the Greater Khingan Mountain of China. The two strains were Gram-stain-negative, non-spore-forming, motile with a single polar flagellum, short rod-shaped bacteria. They were catalase- and oxidase-positive.

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Three strains, designated as LB1R34, LB3P52 and ZT4R6, were isolated from glaciers located on the Tibetan Plateau, PR China. The strains were Gram-stain-negative, aerobic, rod-shaped, non-motile and yellow. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated that they were related to the members of the genus .

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Two yeast strains representing a novel species in the basidiomycetous yeast genus were isolated from flowers of collected in Beijing Olympic Forest Park, PR China. Results of multi-gene phylogenetic analysis indicated that the two strains were closely related to the type strains of (CBS 6294) and (CBS 7687). However, the new isolates differed from CBS 6294 by 1.

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  • Members of the Vibrionaceae family are primarily found in marine environments, but the Rumoiensis clade includes six species, two of which are from non-marine sources.
  • A comparative genome analysis revealed that non-marine species Vibrio casei and Vibrio gangliei lack genes for algal polysaccharide breakdown but have an abundance of glycoside hydrolase genes, indicating adaptations to their environments.
  • The study highlights genomic diversity among the Rumoiensis clade species, showing ongoing changes and conservation of genes that may facilitate species' expansion into different habitats.
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Strain 16W4-4-3 was isolated from the oil-well production water in Qinghai Oilfield, China. Cells were Gram-stain-negative, rod-shaped, catalase- and oxidase-positive, facultatively anaerobic and motile by single polar flagellum. The 16S rRNA gene sequences of strain 16W4-4-3 showed the highest similarities with Pseudomonas profundi M5 (98.

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Strains Sr36 and TMT4-23 were isolated from No. 1 glacier in Xinjiang Uygur Autonomous Region and Toumingmengke glacier in Gansu Province, PR China, respectively. They were Gram-stain-positive and rod-shaped micro-organisms.

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The link between guanine-cytosine (GC) content and thermal adaptation is controversial. Here, we compared maximum growth temperature (T ) and genomics of 78 Cryobacterium strains to avoid unreliable conclusions resulting from distantly phylogenetic groups. Phylogenomic analysis revealed this taxon had much higher diversification than we knew.

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An aerobic, Gram-stain-negative, yellowish, rod-shaped bacterium, designated DJ1R-1, was isolated from water sample from a volcanic lake, located on Da Hinggan Ling Mountain, PR China. Growth of DJ1R-1 optimally occurred at pH 7.0, at 22-25 °C and with 0-0.

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One aerobic, Gram-stain-negative, rod-shaped bacterium, designated strain RB1R5, was isolated from Renlongba glacier in Tibet Autonomous Region, China. Growth was observed at 4-25 °C and pH 7.0-8.

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The Arxan-Chaihe volcanic field of the Da Hinggan mountains in north-East PR China hosts various typical crater lakes. In this study we performed a yeast diversity survey using water sampled from five crater lakes and a total of 122 yeast strains belonging to 33 species of 25 genera were isolated. Three strains, TFL1-L, TFL2B and ATC4C, were identified as three novel species belonging to the based on a multiple gene phylogeny and on the comparison of physiological data.

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