Publications by authors named "Yongsuk Ku"

Cancer secretome is a reservoir for aberrant glycosylation. How therapies alter this post- translational cancer hallmark and the consequences thereof remain elusive. Here, we show that an elevated secretome fucosylation is a pan-cancer signature of both response and resistance to multiple targeted therapies.

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Hypomethylating agents (HMAs), such as azacitidine and decitabine, induce cancer cell death by demethylating DNAs to promote the expression of tumor-suppressor genes. HMAs also reactivate the transcription of endogenous double-stranded RNAs (dsRNAs) that trigger the innate immune response and subsequent apoptosis via viral mimicry. However, the expression patterns of endogenous dsRNAs and their relevance in the efficacy of HMAs remain largely uninvestigated.

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DNA-methyltransferase inhibitors (DNMTis), such as azacitidine and decitabine, are used clinically to treat myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML). Decitabine activates the transcription of endogenous retroviruses (ERVs), which can induce immune response by acting as cellular double-stranded RNAs (dsRNAs). Yet, the posttranscriptional regulation of ERV dsRNAs remains uninvestigated.

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Many innate immune response proteins recognize foreign nucleic acids from invading pathogens to initiate antiviral signaling. These proteins mostly rely on structural characteristics of the nucleic acids rather than their specific sequences to distinguish self and nonself. One feature utilized by RNA sensors is the extended stretch of double-stranded RNA (dsRNA) base pairs.

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Article Synopsis
  • - DNA-reactive compounds like doxorubicin are used in cancer chemotherapy primarily due to their genotoxic effects, which are thought to selectively target dividing cancer cells but can also harm normal cells.
  • - Researchers discovered that doxorubicin targets a noncoding RNA called nc886, which usually inhibits the proapoptotic protein PKR, leading to cell death (apoptosis) when nc886 is depleted.
  • - The mechanism involves doxorubicin shutting down nc886 transcription by evicting RNA polymerase III from DNA, causing PKR to become active, which explains how DNA-damaging drugs can also affect non-dividing normal cells.
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