Publications by authors named "Yong K Kim"

The impact of age on the relationship between body mass index (BMI) and all-cause mortality in hemodialysis (HD) patients is not clearly understood. We analyzed the association between BMI and all-cause mortality, stratified by age, in patients undergoing HD using data from the Korean Renal Data System (KORDS). We analyzed 66,129 HD patients from the 2023 KORDS database, with data collected between 2001 and 2022.

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Alzheimer's disease (AD) prevention is a critical challenge for aging societies, necessitating the exploration of food ingredients and whole foods as potential therapeutic agents. This study aimed to identify natural compounds (NCs) with therapeutic potential in AD using an innovative bioinformatics-integrated deep neural analysis approach, combining computational predictions with molecular docking and in vitro experiments for comprehensive evaluation. We employed the bioinformatics-integrated deep neural analysis of NCs for Disease Discovery (BioDeepNat) application in the data collected from chemical databases.

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  • This study developed a computational pipeline using SELFormer, a transformer-based model, to identify natural compounds that may help in treating Alzheimer's disease by focusing on seven specific genes related to the condition.
  • Researchers employed various analytical methods, including clustering, QSAR, and UMAP, followed by molecular docking and in vitro tests to evaluate the efficacy of selected compounds in biological models.
  • Findings revealed five clusters of natural compounds, with 17 showing strong activity; specific compounds like cowanin and β-caryophyllene exhibited promising results, enhancing cell viability and reducing harmful markers, while also linking these compounds to dietary sources such as mangosteen and celery.
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: To date, population pharmacokinetic (PK) studies of vancomycin on healthy Korean adults have not been conducted. This study aimed to investigate the PK properties of vancomycin in healthy volunteers and to identify optimal dosing regimens based on the area under the concentration-time curve (AUC) in adult patients with normal renal function. : We conducted a prospective clinical study, analysing PK samples from 12 healthy participants using noncompartmental analysis and non-linear mixed-effects modelling.

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  • This study investigates the long-term effects of postoperative acute kidney injury (PO-AKI) on mortality using machine learning to improve predictions over traditional methods.
  • Data from 199,403 patients were analyzed, revealing that those with PO-AKI had significantly lower survival rates, with the most effective prediction model being XGBoost combined with an accelerated failure time model.
  • The findings suggest that machine learning techniques can more accurately predict the risk of mortality after PO-AKI, which could help develop better clinical guidelines and patient interventions.
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This study aimed to develop a population pharmacokinetic (PK) model for meropenem in healthy adults and explore optimal dosing regimens for patients with normal renal function. PK samples were obtained from 12 healthy participants, which were analyzed using noncompartmental analysis and nonlinear mixed-effect modeling. The PK profiles of meropenem were characterized using a two-compartment model, and serum creatinine level was identified as a significant covariate affecting total clearance.

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CARM1 is predominantly localized in the nucleus and plays a pivotal role in maintaining mitochondrial homeostasis by regulating gene expression. It suppresses mitochondrial biogenesis by downregulating PGC-1α and TFAM expression, while promoting mitochondrial fission through increased DNM1L expression. Under oxidative stress, CARM1 translocates to the cytoplasm, where it directly methylates DRP1 and accelerates mitochondrial fission, enhancing reactive oxygen species (ROS) production.

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Autophagy is a cellular process that degrades damaged cytoplasmic components and regulates cell death. The homeostasis of endothelial cells (ECs) is crucial for the preservation of glomerular structure and function in aging. Here, we investigated the precise mechanisms of endothelial autophagy in renal aging.

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Background: This study analyzed data from the end-stage renal disease patient registry collected by the Korean Society of Nephrology to explore trends in mortality among dialysis patients from 2001 to 2022.

Methods: Mortality was analyzed in two ways: firstly, using the annual mortality rate; and secondly, by assessing survivability after a certain period of time since the initiation of dialysis. Additionally, we categorized the causes of death by disease group annually to observe how the proportions changed.

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During muscle regeneration, interferon-gamma (IFN-) coordinates inflammatory responses critical for activation of quiescent muscle stem cells upon injury via the Janus kinase (JAK) - signal transducer and activator of transcription 1 (STAT1) pathway. Dysregulation of JAK-STAT1 signaling results in impaired muscle regeneration, leading to muscle dysfunction or muscle atrophy. Until now, the underlying molecular mechanism of how JAK-STAT1 signaling resolves during muscle regeneration remains largely elusive.

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Hanwoo and Jeju Black cattle (Jeju Black) are native breeds of Korean cattle. Jeju Black cattle are recognized as natural monuments and are known to exhibit slower growth rates compared to Hanwoo. While several studies have analyzed the genetic characteristics of these cattle, there has been limited research on the differences in their microbiome.

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BACKGROUND Papillary fibroelastoma is the most common type of benign primary cardiac tumor and is usually asymptomatic. However, tumor fragments or surface thrombus can embolize and cause transient ischemic attacks, strokes, or myocardial infarction. This report describes a 76-year-old woman who presented with dysarthria and right-sided weakness due to a stroke associated with a left atrial papillary fibroelastoma.

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With an increasing aging population, the mean age of patients with end-stage kidney disease (ESKD) is globally increasing. However, the current clinical status of elderly patients undergoing hemodialysis (HD) is rarely reported in Korea. The current study analyzed the clinical features and trends of older patients undergoing HD from the Korean Renal Data System (KORDS) database.

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The dynamic regulation of mitochondria through fission and fusion is essential for maintaining cellular homeostasis. In this study, we discovered a role of coactivator-associated arginine methyltransferase 1 (CARM1) in mitochondrial dynamics. CARM1 methylates specific residues (R403 and R634) on dynamin-related protein 1 (DRP1).

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  • Recent advancements in organoid technology are pushing for its use instead of animal testing in research.
  • Organoids are particularly useful for testing the toxicity of drugs and chemicals.
  • The paper aims to establish basic guidelines for using human kidney organoids from stem cells as a model for evaluating toxicity.
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This study investigates the effects of varying loading conditions on excitability in neural pathways and gait dynamics. We focussed on evaluating the magnitude of the Hoffman reflex (H-reflex), a neurophysiological measure representing the capability to activate motor neurons and the timing and placement of the foot during walking. We hypothesized that weight manipulation would alter H-reflex magnitude, footfall and lower body kinematics.

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  • * Out of 1,194 septic shock patients, 392 were analyzed; those with normal left ventricular (LV) ejection fraction showed a significant correlation between better shock index values and improved survival.
  • * The findings suggest that shock indices are valuable for predicting mortality in septic shock patients with normal LV function but not in those with decreased LV function, highlighting the need to consider cardiac status when evaluating these indices.
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The β-cell relies predominantly on glucose utilization to generate adenosine triphosphate, which is crucial for both cell viability and insulin secretion. The β-cell has evolved remarkable metabolic flexibility to productively respond to shifts in environmental conditions and changes in glucose availability. Although these adaptive responses are important for maintaining optimal cellular function, there is emerging evidence that the resulting changes in cellular metabolites can impact the epigenome, causing transient and lasting alterations in gene expression.

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Organoids significantly advanced our comprehension of organ development, function, and disease modeling. This Perspective underscores the potential of heart-kidney-connected organoids in understanding the intricate relationship between these vital organs, notably the cardiorenal syndrome, where dysfunction in one organ can negatively impact the other. Conventional models fall short in replicating this complexity, necessitating an integrated approach.

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Elderly patients often have more than one disease that affects walking behavior. An objective tool to identify which disease is the main cause of functional limitations may aid clinical decision making. Therefore, we investigated whether gait patterns could be used to identify degenerative diseases using machine learning.

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Korean Renal Data System (KORDS) is a nationwide end-stage renal disease (ESRD) registry database operated by the Korean Society of Nephrology (KSN). Diabetes mellitus is currently the leading cause of ESRD in Korea; this article provides an update on the trends and characteristics of diabetic ESRD patients. The KORDS Committee of KSN collects data on dialysis centers and patients through an online registry program.

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  • Zinc's role in hepatocellular carcinoma was investigated, focusing on the expression of zinc transporter 1 (ZNT1) and its correlation to clinical outcomes in patients who had surgery for the cancer.
  • The study analyzed 65 patient cases between 2011 and 2015, measuring ZNT1 expression intensity through immunohistochemistry and assessing its relationship with various clinical parameters using statistical tests.
  • Results showed that ZNT1 expression was linked to lower blood zinc levels and shorter overall survival, highlighting ZNT1 as a potential prognostic factor alongside tumor size in hepatocellular carcinoma patients.
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  • - The study investigates the effectiveness of intranasal vaccines against COVID-19 using a recombinant measles virus designed to stimulate immune responses, focusing on both nasal and intramuscular injection routes.
  • - Syrian golden hamsters were used as subjects, receiving either intranasal or intramuscular injections of the vaccine, followed by a SARS-CoV-2 challenge to analyze immune response and virus clearance.
  • - Results showed that intranasal vaccination led to protective immune responses, reduced virus-related symptoms, and effective clearance of SARS-CoV-2, with strong correlations observed in various immune markers and viral load assessments.
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Protein tyrosine phosphatase N2 (PTPN2) is a type 1 diabetes (T1D) candidate gene identified from human genome-wide association studies. PTPN2 is highly expressed in human and murine islets and becomes elevated upon inflammation and models of T1D, suggesting that PTPN2 may be important for β-cell survival in the context of T1D. To test whether PTPN2 contributed to β-cell dysfunction in an inflammatory environment, we generated a β-cell-specific deletion of Ptpn2 in mice (PTPN2-β knockout [βKO]).

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Thermal fatigue cracks occurring in pipes in nuclear power plants pose a high degree of risk. Thermal fatigue cracks are generated when the thermal fatigue load caused by local temperature gradients is repeatedly applied. The flaws are mainly found in welds, owing to the effects of stress concentration caused by the material properties and geometric shapes of welds.

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