Publications by authors named "Yiyang Shi"

Adverse drug reactions (ADRs) are among the global public health events that seriously endanger human life and cause high economic burdens. Therefore, predicting the possibility of their occurrence and taking early and effective response measures is of great significance. Constructing a correlation matrix between drugs and their adverse reactions, followed by effective correlation data mining, is one of the current strategies to predict ADRs using accessible public data.

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Echinococcosis, especially alveolar echinococcosis (AE), is becoming an emerging/re-emerging disease with a growing number of cases reported globally. The diagnosis of echinococcosis is based mainly on imaging, which may be challenging when the image presentation is atypical. We reported one patient with suspected cystic echinococcosis (CE) by imaging.

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Biomedical texts provide important data for investigating drug-drug interactions (DDIs) in the field of pharmacovigilance. Although researchers have attempted to investigate DDIs from biomedical texts and predict unknown DDIs, the lack of accurate manual annotations significantly hinders the performance of machine learning algorithms. In this study, a new DDI prediction framework, Subgraph Enhance model, was developed for DDI (SubGE-DDI) to improve the performance of machine learning algorithms.

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Article Synopsis
  • The study analyzed the relationship between anti-VEGF drugs and adverse events (AEs) using data from the FDA Adverse Event Reporting System over a 17-year period.
  • Five anti-VEGF drugs were linked to various ocular disorders, with pegaptanib and ranibizumab also showing connections to cardiac issues.
  • Notably, ranibizumab exhibited the highest rates of both cardiac and central nervous AEs compared to the other drugs, suggesting the need for awareness of systemic symptoms post-injection.
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Article Synopsis
  • The study explored the use of polyacrylamide gel (PAAG) as a new embedding medium for improving the maintenance of biological tissues during the sectioning process for mass spectrometry imaging.
  • PAAG was compared to other common embedding materials (agarose, gelatin, OCT, and ice) in terms of tissue morphology maintenance and efficiency in ionizing metabolites.
  • The results indicated that PAAG outperformed these traditional media, offering advantages such as a one-step operation, better morphology preservation, reduced interference, and enhanced metabolite ion signals, suggesting its potential as the new standard for metabolite imaging.
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Michler's ethylketone (MEK, 4,4'-bis(diethylamino)benzophenone), commonly-known as an intermediate in the synthesis of dyes and pigments, was successfully screened and optimized as a novel matrix for the enhancement of lipid detection and imaging in tissues by MALDI-MSI. The results show several properties of MEK as a powerful MALDI matrix, including strong UV absorption, µm-sized crystals and uniform matrix-coating, super high vacuum chemical stability, low matrix-related ion interference, super soft ionization, and high lipid ionization efficiency.

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