Publications by authors named "Yinyao Qi"

Plants frequently encounter adverse conditions and stress during their lives. Abscisic acid (ABA) plays a crucial role in response to salt stress, and dynamic regulation of ABA levels is essential for plant growth and stress resistance. In this study, we identified a transcription factor, OsSGL (Oryza sativa Stress tolerance and Grain Length), which acts as a negative regulator in salt stress, controlling ABA synthesis.

View Article and Find Full Text PDF
Article Synopsis
  • Oxygen levels in the rhizosphere significantly affect the composition of root microbiomes, and the role of the FLR7 gene in rice helps regulate these oxygen levels.
  • Research shows that FLR7 negatively impacts the formation of aerenchyma, which are structures in roots that transport oxygen.
  • The study highlights that the absence of FLR7 results in less of a beneficial anaerobic genus, Anaeromyxobacter, in the root microbiota, suggesting that manipulating FLR7 could help enhance rice plants' resilience to flooding through beneficial microorganisms.
View Article and Find Full Text PDF

Pod size is a key agronomic trait that greatly determines peanut yield, the regulatory genes and molecular mechanisms that controlling peanut pod size are still unclear. Here, we used quantitative trait locus analysis to identify a peanut pod size regulator, POD SIZE/WEIGHT1 (PSW1), and characterized the associated gene and protein. PSW1 encoded leucine-rich repeat receptor-like kinase (LRR-RLK) and positively regulated pod stemness.

View Article and Find Full Text PDF

CRISPR-based genome perturbation provides a new avenue to conveniently change DNA sequences, transcription, and epigenetic modifications in genetic screens. However, it remains challenging to assay the complex molecular readouts after perturbation at high resolution and at scale. By introducing an A/G mixed capture sequence into the gRNA scaffold, we demonstrate that gRNA transcripts could be directly reverse transcribed by poly (dT) primer together with the endogenous mRNA, followed by high-content molecular phenotyping in scRNA-seq (Direct-seq).

View Article and Find Full Text PDF

Cell expansion is coordinated by several cues, but available energy is the major factor determining growth. Receptor protein kinase FERONIA (FER) is a master regulator of cell expansion, but the details of its control mechanisms are not clear. Here we show that FER interacts with cytosolic enzyme glyceraldehyde-3-phosphate dehydrogenase (GAPDH, GAPC1 and GAPC2), that catalyzes a key reaction in glycolysis, which contributes to energy production.

View Article and Find Full Text PDF