Publications by authors named "Yinggao Liu"

Rhombic-spot disease, caused mainly by , significantly impacts the yield and quality of fishscale bamboo (). Xylanases are essential for pathogenic fungi infection, yet their specific functions in the physiology and pathogenicity of remain unclear. Here, we characterized three xylanase proteins with glycosyl hydrolase 11 domains from the SICAUCC 16-0001 genome and examined the function of Nsxyn1 and Nsxyn2.

View Article and Find Full Text PDF

The biomolecular condensates (BCs) formed by proteins through phase separation provide the necessary space and raw materials for the orderly progression of cellular activities, and on this basis, various membraneless organelles (MLOs) are formed. The occurrence of eukaryotic phase separation is driven by multivalent interactions from intrinsically disordered regions (IDRs) and/or specific protein/nucleic acid binding domains and is regulated by various environmental factors. In plant and animal cells, the MLOs involved in gene expression regulation, stress response, and mitotic control display similar functions and mechanisms.

View Article and Find Full Text PDF
Article Synopsis
  • - The study investigates how certain bacteria associated with plants can degrade the plant hormone Indole-3-acetic acid (IAA), which plays a vital role in plant growth and development.
  • - Out of 183 bacterial isolates from plant roots, 21 were identified as capable of breaking down IAA, and genomic analyses revealed key genes related to IAA degradation.
  • - The presence of these IAA-degrading bacteria not only helps mitigate root growth inhibition in plants like Arabidopsis and rice but also indicates a complex relationship between IAA producers and degraders in plant microbiomes.
View Article and Find Full Text PDF

Plants frequently evade extreme environmental stress by initiating early flowering, yet the underlying mechanisms remain incompletely understood. Here, through extensive mutant screening, we identify a vegetative growth to reproductive growth transition factor (vrf1) mutant, which exhibits a deficiency in drought escape. Alternative splicing of VRF1 generates four isoforms, of which two encode functional proteins, VRF1-AS1 and VRF1-AS3.

View Article and Find Full Text PDF
Article Synopsis
  • Bamboo is gaining global attention for its regenerative ability, but it faces threats like rhombic-spot disease caused by specific pathogens.
  • This study analyzed the genomes of two strains of the pathogen using advanced sequencing technologies and found a similarity in gene characteristics related to pathogenicity, with some gene families contracted.
  • Insights from this research highlight unique traits of the pathogens and their potential impacts on bamboo management strategies, especially regarding xylan decomposition over other substances like pectin and cellulose.
View Article and Find Full Text PDF

(, ) species are parasitic fungi with a wide global distribution, causing tar spots on plants. In this study, we describe three newly discovered species: , , and from in China. These species were characterized using morphological traits and multi-locus phylogeny based on the internal transcribed spacer region (ITS) with the intervening 5.

View Article and Find Full Text PDF
Article Synopsis
  • * Researchers conducted experiments to identify the pathogen and evaluated factors like carbon sources, temperature, and pH that influenced its growth, concluding that sucrose, 25°C, and pH 7 were optimal conditions.
  • * The study also tested various fungicides, finding difenoconazole to be the most effective, and established optimal concentration ratios for better disease control, which can inform future management practices for the white root rot in Sichuan.
View Article and Find Full Text PDF
Article Synopsis
  • Fungal effectors are important for how pathogenic fungi interact with their hosts, affecting disease development and pathogen spread.
  • The study focused on CFEM proteins from a specific fungus, identifying 19 proteins and highlighting two—NsCFEM1 and NsCFEM2—as potential effectors due to their lack of transmembrane domains.
  • NsCFEM1 was found to inhibit programmed cell death and is linked to fungal virulence, while NsCFEM2 is associated with cell wall stability, laying groundwork for understanding how these proteins influence host interactions in the studied disease.
View Article and Find Full Text PDF

is the major pathogen responsible for the significant stem disease "blight" in × . The interacting proteins of the key pathogenic factor , BDUbc and BDSKL1, have previously been obtained by two-hybrid, BiFC, GST pull-down yeast assays. However, the functions of these interacting proteins remain unknown.

View Article and Find Full Text PDF

ZmMRPA6 was cloned and characterized as the first ATP-binding cassette (ABC) transporter in maize to be proven to participate in cold and salt tolerance. Homologous genes AtABCC4 and AtABCC14 of ZmMRPA6 also responded to salt stress. ATP-binding cassette (ABC) proteins are major transmembrane transporters that play significant roles in plant development against various abiotic stresses.

View Article and Find Full Text PDF

Leaf spot is a common disease of (), which can seriously harm the plant's ability to grow, flower, and fruit. Therefore, it is important to identify the mechanism of leaf spot caused by () for thorough comprehension and disease control. In this study, to verify whether the mycotoxins produced by cause leaf spot disease, the best medium for , namely PDB, was used.

View Article and Find Full Text PDF

Desiccation is typically fatal, but a small number of land plants have evolved vegetative desiccation tolerance (VDT), allowing them to dry without dying through a process called anhydrobiosis. Advances in sequencing technologies have enabled the investigation of genomes for desiccation-tolerant plants over the past decade. However, a dedicated and integrated database for these valuable genomic resources has been lacking.

View Article and Find Full Text PDF

Chinese pepper rust is a live parasitic fungal disease caused by , which seriously affects the cultivation and industrial development of . Cultivating and planting resistant cultivars is considered the most economical and environmentally friendly strategy to control this disease. Therefore, the mining of excellent genes for rust resistance and the analysis of the mechanism of rust resistance are the key strategies to achieve the targeted breeding of rust resistance.

View Article and Find Full Text PDF

Salt stress causes osmotic stress, ion toxicity and oxidative stress, inducing the accumulation of abscisic acid (ABA) and excessive reactive oxygen species (ROS) production, which further damage cell structure and inhibit the development of roots in plants. Previous study showed that vitamin B (VB) plays a role in plant responses to salt stress, however, the regulatory relationship between ROS, VB and ABA under salt stress remains unclear yet in plants. In our study, we found that salt stress-induced ABA accumulation requires ROS production, in addition, salt stress also promoted VB (including pyridoxamine (PM), pyridoxal (PL), pyridoxine (PN), and pyridoxal 5'-phosphate (PLP)) accumulation, which involved in ROS scavenging and ABA biosynthesis.

View Article and Find Full Text PDF

The fungal genus consists of species mostly occurring as parasites of scale insects, but are also commonly isolated from soil or lichens. In the present study, we surveyed the diversity and assess the taxonomy of entomopathogenic fungi in Sichuan Province, China. Two new species of , viz.

View Article and Find Full Text PDF
Article Synopsis
  • * In a study with a dioecious poplar species, male plants outperformed female plants under both drought and normal conditions, and females showed more leaf damage after pathogen infection, although drought stress altered these effects.
  • * Microbiome analysis revealed that drought conditions led to females having beneficial microbes that help protect against pathogens, while males had more harmful pathogens, suggesting that managing plant sex could improve resilience in drought-prone areas.
View Article and Find Full Text PDF
Article Synopsis
  • SR proteins are crucial splicing factors that interact with precursor mRNAs to aid in RNA processing, contributing to plant growth and stress response.
  • Alternative splicing, facilitated by SR proteins, enhances gene and protein diversity by allowing different mRNA forms to be created from the same gene.
  • Despite being recognized in plants for over thirty years, there's still limited knowledge about their evolution, functions, and regulatory networks compared to SR proteins in animals.
View Article and Find Full Text PDF

Taxus chinensis var. mairei is the endemic, endangered, and first-class protected tree species in China. This species is considered as an important resource plant because it can produce Taxol which is an effective medicinal compound against various cancers (Zhang et al.

View Article and Find Full Text PDF

English walnut (Juglans regia), has high economic and ecological value. As an important tree species for eliminating poverty, it is planted in many Provinces of China. In 2021, new pathogenic fungi were observed in English walnut in Guangyuan City, Sichuan Province, China.

View Article and Find Full Text PDF
Article Synopsis
  • Walnut trees (Juglans regia) are important for their wood and nuts and face a significant threat from a fungal disease causing trunk rot, impacting around 30% of trees observed in Chongzhou City, China.
  • The disease manifests through purple necrotic lesions and water-soaked plaques on infected bark, with fungal colonies showing distinct morphological changes over time under specific growth conditions.
  • Analysis of diseased trees identified Ectostromata and Ascomata structures consistent with the fungus Myrmaecium fulvopruinatum, and molecular techniques were used for further genomic study of the pathogen.
View Article and Find Full Text PDF

Alternative splicing (AS) is one of the major post-transcriptional regulation mechanisms that contributes to plant responses to various environmental perturbations. Darkness and heat are two common abiotic factors affecting plant growth, yet the involvement and regulation of AS in the plant responses to these signals remain insufficiently examined. In this study, we subjected Arabidopsis seedlings to 6 h of darkness or heat stress and analyzed their transcriptome through short-read RNA sequencing.

View Article and Find Full Text PDF

The formation of mature mRNA requires cutting introns and splicing exons. The occurrence of splicing involves the participation of the spliceosome. Common spliceosomes mainly include five snRNPs: U1, U2, U4/U6, and U5.

View Article and Find Full Text PDF

() causes branch blight of walnuts, which leads to significant economic loss. The molecular mechanism behind the response of walnuts remains unknown. Paraffin sectioning and transcriptome and metabolome analyses were performed to explore the changes in tissue structure, gene expression, and metabolic processes in walnut after infection with .

View Article and Find Full Text PDF

Microorganisms associated with the phyllosphere play a crucial role in protecting plants from diseases, and their composition and diversity are strongly influenced by heavy metal contaminants. Dioecious plants are known to exhibit sexual dimorphism in metal accumulation and tolerance between male and female individuals. Hence, in this study we used male and female full-siblings of Populus deltoides to investigate whether the two sexes present differences in their phyllosphere microbiome structures and in their associated resistance to the leaf pathogenic fungus Pestalotiopsis microspora after exposure to excess soil cadmium (Cd).

View Article and Find Full Text PDF