Multi-wavelength multi-direction laser light scattering for cell characterization using machine learning-based methods.

Cell identification and analysis play a crucial role in many biology- and health-related applications. The internal and surface structures of a cell are complex and many of the features are sub-micron in scale. Well-resolved images of these features cannot be obtained using optical microscopy.

Skin Lesion Segmentation Using Deep Learning with Auxiliary Task.

Skin lesion segmentation is a primary step for skin lesion analysis, which can benefit the subsequent classification task. It is a challenging task since the boundaries of pigment regions may be fuzzy and the entire lesion may share a similar color. Prevalent deep learning methods for skin lesion segmentation make predictions by ensembling different convolutional neural networks (CNN), aggregating multi-scale information, or by multi-task learning framework.

A real-time light-scattering technique for tailings solids measurement.

This study presents the concept of an economic in situ light-scattering sensor for real-time measurement of the solid content in tailings facilities. An experimental setup using a blue (405 nm wavelength) laser diode and silicon photodiodes was constructed to measure the angular distribution of the intensity of scattered light. It was found that the angular intensity of scattered light for tailing samples follows a cos (θ) relation with n ≈ 1.

Effect of in-package atmospheric cold plasma discharge on microbial safety and quality of ready-to-eat ham in modified atmospheric packaging during storage.

Listeria monocytogenes is often responsible for postprocessing contamination of ready-to-eat (RTE) products including cooked ham. As an emerging technology, atmospheric cold plasma (ACP) has the potential to inactivate L. monocytogenes in packaged RTE meats.

Cold plasma treatment of ready-to-eat ham: Influence of process conditions and storage on inactivation of Listeria innocua.

Ready-to-eat (RTE) deli meat has been linked to several Listeria monocytogenes associated recalls. Recent studies demonstrated the potential antimicrobial effects of atmospheric cold plasma treatment on various food surfaces including RTE meat products. However, the influence of intrinsic and extrinsic factors, determining the efficacy of cold plasma to reduce Listeria has not been reported.

Self-referenced single-shot THz detection.

We demonstrate a self-referencing method to reduce noise in a single-shot terahertz detection scheme. By splitting a single terahertz pulse and using a reflective echelon, both the signal and reference terahertz time-domain waveforms were measured using one laser pulse. Simultaneous acquisition of these waveforms significantly reduces noise originating from shot-to-shot fluctuations.

Physical characterization of hematopoietic stem cells using multidirectional label-free light scatterings.

An experimental setup capable of measuring simultaneous 2D scattered light angular distribution from two directions to study cell morphology without the use of bio-labels was developed. Experiments with hematopoietic stem cells (CD34 cells) show good agreement with detailed numerical simulations of light scattering. Numerical simulations and computer models of cells are used to identify physical features of cells with the largest scattering cross sections.

Quasi-3D Modeling and Efficient Simulation of Laminar Flows in Microfluidic Devices.

A quasi-3D model has been developed to simulate the flow in planar microfluidic systems with low Reynolds numbers. The model was developed by decomposing the flow profile along the height of a microfluidic system into a Fourier series. It was validated against the analytical solution for flow in a straight rectangular channel and the full 3D numerical COMSOL Navier-Stokes solver for flow in a T-channel.

Effect of low-intensity pulsed ultrasound on orthodontically induced root resorption in beagle dogs.

We investigated the effect of low-intensity pulsed ultrasound (LIPUS) on orthodontically induced inflammatory root resorption in vivo. Ten beagle dogs were treated with an orthodontic appliance to move the mandibular fourth premolars bodily. The orthodontic movement was carried out for 4 wk with a continuous force of 1 N/side; using a split-mouth model, LIPUS was applied daily for 20 min.

Production of 70-nm Cr dots by laser-induced forward transfer.

The effect of donor film thickness and laser beam fluence on the size of laser-induced forward transfer (LIFT) spots is studied to achieve sub-100 nm features. A 130 fs, 800 nm laser is focused on ultrathin Cr films, and the transfer and ablation thresholds of these films at various thicknesses are determined. The minimum transfer spot size decreases with decreasing donor film thickness and incident laser fluence.

Permanent fine tuning of silicon microring devices by femtosecond laser surface amorphization and ablation.

We demonstrate the fine tuning capability of femtosecond laser surface modification as a permanent trimming mechanism for silicon photonic components. Silicon microring resonators with a 15 µm radius were irradiated with single 400 nm wavelength laser pulses at varying fluences. Below the laser ablation threshold, surface amorphization of the crystalline silicon waveguides yielded a tuning rate of 20 ± 2 nm/J · cm(-2)with a minimum resonance wavelength shift of 0.

Short-term effect of low-intensity pulsed ultrasound on an ex-vivo 3-d tooth culture.

We investigated the short-term effect of LIPUS on human dentin-pulp complex in vitro. We collected sixty-three premolars from patients who needed the extraction. The premolars were sectioned transversely into 600-μm-thick slices, and then divided into five groups according to LIPUS application time (control, 5, 10, 15 and 20 min).

Schottky barrier thin film transistors using solution-processed n-ZnO.

Solution-processed ZnO thin films are attractive as active materials in thin film transistors (TFTs) for low-cost electronic device applications. However, the lack of true enhancement mode operation, low mobility, and unreliability in transistor characteristics due to the high density of traps and other defects present challenges in using such TFTs in circuits. We demonstrate in this report that the electrical characteristics of such TFTs can be improved by source injection barriers.

Femtosecond laser tuning of silicon microring resonators.

Femtosecond laser modification is demonstrated as a possible method for postfabrication tuning of silicon microring resonators. Single 400 nm femtosecond laser pulses were used to modify the effective index of crystalline silicon microring waveguides by either amorphization or surface nanomilling depending on the laser fluence. Both blue- and redshifts in the microring resonance could be achieved without imparting significant degradation to the device quality factor.

Long term effect of low intensity pulsed ultrasound on a human tooth slice organ culture.

Objective: Investigate the effect of therapeutic Low Intensity Pulsed Ultrasound (LIPUS) on human dentine-pulp complex in an in vitro model.

Design: 92 premolars were extracted from 23 adolescent orthodontic patients. The premolars were sectioned transversely into 600 μm thick slices.

Label-free and noninvasive optical detection of the distribution of nanometer-size mitochondria in single cells.

A microfluidic flow cytometric technique capable of obtaining information on nanometer-sized organelles in single cells in a label-free, noninvasive optical manner was developed. Experimental two-dimensional (2D) light scattering patterns from malignant lymphoid cells (Jurkat cell line) and normal hematopoietic stem cells (cord blood CD34+ cells) were compared with those obtained from finite-difference time-domain simulations. In the simulations, we assumed that the mitochondria were randomly distributed throughout a Jurkat cell, and aggregated in a CD34+ cell.

Microscope-based label-free microfluidic cytometry.

A microscope-based label-free microfluidic cytometer capable of acquiring two dimensional light scatter patterns from single cells, pattern analysis of which determines cellular information such as cell size, orientation and inner nanostructure, was developed. Finite-difference time-domain numerical simulations compared favorably with experimental scatter patterns from micrometer-sized beads and cells. The device was capable of obtaining light scattering patterns from the smallest mature blood cells (platelets) and cord blood hematopoietic stem/progenitor cells 
(CD34 + cells) and myeloid precursor cells.

Wide-angle light-scattering differentiation of organelle-size particle distributions in whole cells.

A finite-difference time-domain (FDTD) method is used to study the multiple scattering from many organelle-size particles distributed in a biological cell. Conventional flow cytometry, where the small-angle forward scatter (FSC) intensity and side scatter (SSC) intensity are used for cell characterizations, may have difficulties to differentiate the organelle distributions in biological cells. Based on the FDTD simulations, a light-scattering methodology is proposed here to overcome such a problem.

Characterization of the preformed plasma for high-intensity laser-plasma interaction.

The interaction of a very intense, very short laser pulse is modified by the presence of a preformed plasma prior to the main short pulse. The preformed plasma is created by a small prepulse interacting with the target prior to the main pulse. The prepulse has been monitored using a water-cell-protected fast photodiode allowing on every shot a high dynamic measurement of the pulse profile.

Photoluminescence emission profiles of Y(2)O(3) : Eu films composed of high-low density stacks produced by glancing angle deposition.

Periodic high-/low-index film stacks composed of Y(2)O(3) : Eu were grown by glancing angle deposition on silicon and fused silica substrates. Postdeposition annealing at temperatures from 600 to 1000 degrees C for 1 h in air was performed to activate photoluminescence. Absolute photoluminescence spectra were obtained as a function of observation angle.

Detection of lead in water using laser-induced breakdown spectroscopy and laser-induced fluorescence.

Laser-induced breakdown spectroscopy (LIBS) is a well-known technique for fast, stand-off, and nondestructive analysis of the elemental composition of a sample. We have been investigating micro-LIBS for the past few years and demonstrating its application to microanalysis of surfaces. Recently, we have integrated micro-LIBS with laser-induced fluorescence (LIF), and this combination, laser ablation laser-induced fluorescence (LA-LIF), allows one to achieve much higher sensitivity than traditional LIBS.

Evaluation of femtosecond LIBS for spectrochemical microanalysis of aluminium alloys.

The analytical performance of femtosecond laser-induced breakdown spectroscopy (LIBS) for elemental microanalysis of aluminium alloys and for mapping precipitate distribution on the sample surface has been studied in detail. A Ti-sapphire laser system producing pulses of 130 fs at 800 nm was used to generate the laser-induced plasma. Multi-element microanalysis of commercially available aluminium alloys was performed in air at atmospheric pressure.

Spectrochemical microanalysis of aluminum alloys by laser-induced breakdown spectroscopy: identification of precipitates.

Multielemental microanalysis of commercially available aluminum alloys has been performed in air by laser-induced breakdown spectroscopy (LIBS) by use of UV laser pulses with energies below 10 microJ. It is shown that the LIBS technique is capable of detecting the elemental composition of particles less than 10 microm in size, such as precipitates in an aluminum alloy matrix, by using single laser shots. Chemical mapping with a lateral resolution of approximately 10 microm of the distribution of precipitates in the surface plane of a sample was also carried out.