Publications by authors named "Yilin Ren"

Whey powder (WP), a dairy by-product with high biochemical oxygen demand (BOD) and chemical oxygen demand (COD), presents challenges due to its high production, low-value utilization, and environmental pollution. Based on the idea of turning waste into treasure, high-value use of WP was studied. Firstly, an engineered Bacillus subtilis co-expressing β-galactosidase (β-Gal) and L-arabinose isomerase (LAI) was constructed, which ultimately yielded 77.

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Rare sugars are paid more attention because of which have the characteristics of low calorie, low absorption and excellent physiological functions. Biotechnological synthesis of rare sugars has the advantages of being green, clean, simple and economic compared to chemical synthesis. Abundant enzymes for rare sugars biosynthesis are introduced and multienzyme cascade catalytic system (MECCS) used in biosynthesis of rare sugars is highlighted in this paper.

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The aromatic compound β-phenylethanol (2-PE) is inherently toxic and can inhibit cell activity in Saccharomyces cerevisiae, making it highly challenging to enhance strain tolerance through rational design due to the lack of reliable connections between tolerance phenotype and genetic loci. This study employed adaptive laboratory evolution strategy to investigate the tolerance characteristics of S. cerevisiae S288C under inhibitory concentrations of 2-PE.

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Frequency-scanning interferometry (FSI) is a high-precision distance measurement method. When applied to high-speed moving targets in narrow spaces, the initial short distance combined with significant Doppler effects due to motion can cause the FSI signal to exhibit negative frequency components. Because frequency identification methods only recognize positive frequencies, phase extraction is limited to phase increments, which in turn leads to errors in the initial clearance value derived from the slope demodulation of the phase increment.

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Background: The prognostic value and clinical relevance of tumor-infiltrating lymphocytes (TILs) and tumor-associated macrophages (TAMs) in esophageal squamous cell carcinoma (ESCC) remain unclear.

Aims: To investigate the prognostic value and functional involvement of TILs in ESCC.

Methods: We included 40 patients across different stages of ESCC from Xinjiang.

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Article Synopsis
  • * RNA-sequencing indicated that an HMD led to increased lipid synthesis, cholesterol metabolism, and inflammation-related pathways in the liver.
  • * Gut microbial analysis showed harmful shifts in the microbiome and decreased levels of beneficial bioactive lipids, suggesting that while methionine is necessary, too much can harm gut and liver health.
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Diet is a key player in gut-liver axis. However, the effect of different dietary patterns on gut microbiota and liver functions remains unclear. Here, we used rodent standard chow and purified diet to mimic two common human dietary patterns: grain and plant-based diet and refined-food-based diet, respectively and explored their impacts on gut microbiota and liver.

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Article Synopsis
  • Probiotics, specifically lactic acid bacteria (LAB), can help protect against liver damage from alcohol by regulating gut health and the gut-liver connection.
  • The study tested various LAB strains on mice and found that pretreatments significantly reduced harmful liver enzymes and improved liver health markers.
  • Some strains, particularly JN-8, showed the best results in reducing inflammation, improving the intestinal barrier, and correcting gut microbiota and bile acid issues.
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Background And Aims: Liver hepatocellular carcinoma (LIHC) exhibits a multifactorial etiology, insidious onset, and a significantly low 5-year survival rate. We aimed to evaluate the causal impact of exposure factors (Alzheimer's disease, platelet count, ambidextrousness, cigarettes smoked per day, alcohol consumption, and endocarditis) on the risk of LIHC using a two-sample Mendelian randomization (MR) study.

Methods: Independent single nucleotide polymorphisms (SNPs) strongly associated with Alzheimer's disease, platelet count, ambidextrousness, daily cigarette consumption, alcohol intake, and endocarditis were selected as instrumental variables (IVs) from the corresponding genome-wide association studies (GWAS).

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Colorectal cancer (CRC), a major global health concern, may be influenced by dietary protein digestibility impacting gut microbiota and metabolites, which is crucial for cancer therapy effectiveness. This study explored the effects of a casein protein diet (CTL) versus a free amino acid (FAA)-based diet on CRC progression, gut microbiota, and metabolites using carcinogen-induced (AOM/DSS) and spontaneous genetically induced ( mice) CRC mouse models. Comprehensive approaches including 16s rRNA gene sequencing, transcriptomics, metabolomics, and immunohistochemistry were utilized.

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β-Phenylethanol (2-PE), as an important flavor component in wine, is widely used in the fields of flavor chemistry and food health. 2-PE can be sustainably produced through Saccharomyces cerevisiae. Although significant progress has been made in obtaining high-yield strains, as well as improving the synthesis pathways of 2-PE, there still lies a gap between these two fields to unpin.

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Pheochromocytoma/paraganglioma (PGPG) is a rare neuroendocrine tumor. Amino acid metabolism is crucial for energy production, redox balance, and metabolic pathways in tumor cell proliferation. This study aimed to build a risk model using amino acid metabolism-related genes, enhancing PGPG diagnosis and treatment decisions.

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Article Synopsis
  • Lung adenocarcinoma (LADC) is the most common type of lung cancer and a major cause of cancer-related deaths, with the gut microbiota playing a significant role in influencing the response to chemotherapy.
  • The study found that combining oxaliplatin with a specific treatment (not named in the text) showed a stronger effect in inhibiting tumor growth than using oxaliplatin alone in mice, positively affecting the gut microbiota and immune cell composition.
  • The research indicates that altering gut microbiota and immune cell interactions could be crucial in developing better treatments for LADC, suggesting that their combination might serve as an effective adjuvant therapy in cancer treatment.
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Dietary polyphenols are reported to alleviate colitis by interacting with gut microbiota which plays an important role in maintaining the integrity of the intestinal barrier. As a type of dietary polyphenol, whether ligustroside (Lig) could alleviate colitis has not been explored yet. Here, we aimed to determine if supplementation of ligustroside could improve colitis.

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Apoptosis is a physiological cell death phenomenon, representing one of the fundamental physiological mechanisms for maintaining homeostasis in living organisms. Previous studies have observed typical apoptotic features in Carassius auratus gibelio caudal fin cell (GiCF) infected with Cyprinid herpesvirus 2 (CyHV-2), and found a significant up-regulation of ccBAX expression in these infected cells. However, the specific apoptotic mechanism involved remains unclear.

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Juice fermented with lactic acid bacteria (LAB) has received attention due to its health benefits, such as antioxidant and anti-inflammatory. Previous research on LAB-fermented goji juice mainly focused on exploring the changes in the metabolite profile and antioxidant activity , whereas the liver protection properties of LAB-fermented goji juice are still unknown. This study aimed to investigate the effects of E10-fermented goji juice (E10F), M-fermented goji juice (MF), LGG-fermented goji juice (LGGF) on preventing acute alcoholic liver injury with physiology, gut microbial, and metabolic profiles in mice.

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Non-alcoholic fatty liver disease (NAFLD) has become a serious public health issue due to changing dietary patterns and composition. However, the relationship between NAFLD occurrence and food additives, such as preservatives, remains unknown. This study aimed to evaluate the toxicity of parabens, namely methylparaben (MeP) and ethylparaben (EtP), in relation to NAFLD occurrence in mice under different dietary conditions.

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Background: Advanced colorectal adenomas are at a risk of malignant transformation following endoscopic resection, and colonoscopic monitoring interval after polypectomy have been widely used. This study aims to investigate the prevailing state of compliance with postoperative colonoscopic surveillance among patients with advanced colorectal adenomas and its' influencing factors at Affiliated Hospital of Jiangnan University between November 2020 and April 2021.

Methods: A retrospective analysis was conducted on patients who underwent endoscopic treatment for ACA at Affiliated Hospital of Jiangnan University from November 2020 to April 2021.

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Background: gastritis is a common stomach disease with a high global incidence and can potentially develop into gastric cancer. The treatment of gastritis focuses on medication or diets based on national guidelines. However, the specific diet that can alleviate gastritis remains largely unknown.

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Background: Disulfidptosis and the disulfidptosis-related gene SLC7A11 have recently attracted significant attention for their role in tumorigenesis and tumour management. However, its association with adrenocortical carcinoma (ACC) is rarely discussed.

Methods: Differential analysis, Cox regression analysis, and survival analysis were used to screen for the hub gene SLC7A11 in the TCGA and GTEx databases and disulfidptosis-related gene sets.

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Objective: The aim of this study was to translate the Athletes' Received Support Questionnaire (ARSQ) for Chinese athletes and examine the reliability and validity of the ARSQ with Chinese subjects.

Methods: In this study, we conducted a forward-backward translation of the ARSQ and used data collected from Chinese athletes to perform exploratory and confirmatory factor analyses. A total of 580 Chinese athletes completed the formal ARSQ for the confirmatory factor analysis (CFA), while 230 athletes participated in the preliminary survey.

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Probiotics are used to prevent antibiotic-associated diarrhea (AAD) via the restoration of the gut microbiota. However, the precise effects of Akkermansia muciniphila (Akk), which is a promising probiotics, on AAD are unknown. Here, AAD models were established via the administration of lincomycin and ampicillin with or without pasteurized Akk or Amuc_1100 treatment.

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Introduction: Ribonucleotide reductase (RR) is essential for the replication of the double-stranded DNA virus CyHV-2 due to its ability to catalyze the conversion of ribonucleotides to deoxyribonucleotides, and is a potential target for the development of antiviral drugs to control CyHV-2 infection.

Methods: Bioinformatic analysis was conducted to identify potential homologues of RR in CyHV-2. The transcription and translation levels of ORF23 and ORF141, which showed high homology to RR, were measured during CyHV-2 replication in GICF.

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Article Synopsis
  • The study aimed to compare the effectiveness of various colorectal cancer (CRC) screening methods, including colonoscopy, faecal immunochemical testing (FIT), and stool DNA (sDNA) testing, among 842 volunteers over one year.
  • Results showed that FIT and sDNA testing both had 100% success in detecting CRC, with the combination of tests providing significantly higher sensitivity for identifying advanced adenomas and nonadvanced adenomas compared to individual tests.
  • The findings suggest that using a combination of the APCS score, FIT, and sDNA tests improves diagnostic accuracy and overall efficiency for CRC screenings, making it a better approach for detecting positive lesions.
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