Publications by authors named "Yen-Lin Chu"

Article Synopsis
  • The study examined the connection between certain bacteria (pks E. coli, Enterotoxigenic Bacteroides fragilis, and Fusobacterium nucleatum) and colorectal cancer (CRC) by analyzing DNA samples from various cohorts.
  • Results revealed that pks E. coli is linked to male CRC patients and a specific APC gene mutation, mainly in early-onset cases, while F. nucleatum correlates with various cancer traits including DNA repair deficiencies and specific tumor locations.
  • The findings suggest that pks E. coli might cause DNA damage related to the identified mutation, and F. nucleatum exists in both hereditary and sporadic factors of DNA mismatch repair deficiencies, highlighting the importance of the tumor environment for bacterial colon
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Article Synopsis
  • The study investigates a unique multi-generation family affected by colorectal cancer (CRC) with pathogenic variants in the BRCA1 and RNF43 genes, which are linked to breast/ovarian cancer and Serrated Polyposis Syndrome, respectively.
  • Out of 105 families eligible for Familial Colorectal Cancer Type X, this particular family underwent whole exome sequencing, revealing 10 carriers of a BRCA1 variant and 8 of an RNF43 variant, with some individuals developing CRC.
  • The analysis showed loss of heterozygosity in CRC tumors related to both genes, indicating that both BRCA1 and RNF43 play critical roles in the development of CRC through digenic inheritance and homologous recombination
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Purpose: Although androgen deprivation therapy (ADT) and androgen receptor (AR) signaling inhibitors are effective in metastatic prostate cancer, resistance occurs in most patients. This phase I/II trial assessed the safety, pharmacokinetic impact, and efficacy of the glucocorticoid receptor (GR) antagonist mifepristone in combination with enzalutamide for castration-resistant prostate cancer (CRPC).

Patients And Methods: One hundred and six patients with CRPC were accrued.

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Purpose: Circulating tumor cells (CTC) are under investigation as a minimally invasive liquid biopsy that may improve risk stratification and treatment selection. CTCs uniquely allow for digital pathology of individual malignant cell morphology and marker expression. We compared CTC features and T-cell counts with survival endpoints in a cohort of patients with metastatic genitourinary cancer treated with combination immunotherapy.

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In this paper, 100 nm-thick zinc oxide (ZnO) films were deposited as a seed layer on Corning glass substrates via a radio frequency (RF) magnetron sputtering technique, and vertical well-aligned Fe-doped ZnO (FZO) nanorod (NR) arrays were then grown on the seed layer-coated substrates via a low-temperature solution method. FZO NR arrays were annealed at 600 °C and characterized by using field emission scanning microscopy (FE-SEM) and X-ray diffraction spectrum (XRD) analysis. FZO NRs grew along the preferred (002) orientation with good crystal quality and hexagonal wurtzite structure.

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An ultraviolet-enhanced (UV-enhanced) nitric oxide (NO) sensor based on silver-doped zinc oxide (ZnO) nanoflowers is developed using a low-cost hydrothermal method. The results indicate that silver (Ag) ions were doped into the ZnO nanostructure successfully, thus changing the morphology. In the high-resolution transmission electron microscopy images, we also found that some Ag ions were separated out onto the surface of the ZnO nanoflowers and that the Ag-doped and Ag nanoparticles improved the sensing property.

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Long-lived resting memory CD4+ T cells (T) are a major reservoir of latent HIV infection. We hypothesized that latent HIV-T cells are maintained by aberrant expression of cell survival factors, including XIAP, BIRC2/cIAP1, and beclin-1. DIABLO/SMAC mimetics are therapeutic agents that compromise cell survival by hijacking host apoptotic machinery.

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The role of ascorbate (AsA) recycling via dehydroascorbate reductase (DHAR) in the tolerance of Chlamydomonas reinhardtii to photo-oxidative stress was examined. The activity of DHAR and the abundance of the CrDHAR1 (Cre10.g456750) transcript increased after moderate light (ML; 750 µmol m s) or high light (HL; 1,800 µmol m s) illumination, accompanied by dehydroascorbate (DHA) accumulation, decreased AsA redox state, photo-inhibition, lipid peroxidation, HO overaccumulation, growth inhibition and cell death.

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In this paper, we applied the Fourier Transformation as a notion to calculate the orientation of hexagonal graphene domains on Cu substrate. We developed that a hexagon function to describe the diffraction pattern of hexagonal graphene. Hexagonal graphene domains grown on Cu (111) has an average value of orientation surrounding 3° in the frequency domain.

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Article Synopsis
  • Histone deacetylase inhibitors (HDACi) are being tested as part of a "shock-and-kill" strategy to activate and eliminate latent HIV in CD4(+) T cells, aiming for a "sterilizing cure."
  • The study found that while HDACi don't make macrophages more susceptible to HIV infection, they do reduce the release of HIV from these cells by promoting its degradation through an autophagy pathway.
  • The research highlights the importance of autophagy in controlling HIV infection and underscores the need to consider potential unintended effects when using HDACi as part of HIV treatment strategies.
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Acetylation of non-histone proteins is increasingly recognized as an important post-translational modification for controlling the actions of various cellular processes including DNA repair and damage response. Here, we report that the human MutS homologue hMSH4 undergoes acetylation following DNA damage induced by ionizing radiation (IR). To determine which acetyltransferases are responsible for hMSH4 acetylation in response to DNA damage, potential interactions of hMSH4 with hTip60, hGCN5, and hMof were analyzed.

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Background: DNA mismatch repair proteins participate in diverse cellular functions including DNA damage response and repair. As a member of this protein family, the molecular mechanisms of hMSH4 in mitotic cells are poorly defined. It is known that hMSH4 is promiscuous, and among various interactions the hMSH4-hMSH5 interaction is involved in recognizing DNA intermediate structures arising from homologous recombination (HR).

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Although increasing evidence has suggested that the hMSH5 protein plays an important role in meiotic and mitotic DNA recombinational repair, its precise functions in recombination and DNA damage response are presently elusive. Here we show that the interaction between hMSH5 and c-Abl confers ionizing radiation (IR)-induced apoptotic response by promoting c-Abl activation and p73 accumulation, and these effects are greatly enhanced in cells expressing hMSH5(P29S) (i.e.

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In the midst of new investigations into the mechanisms of both delivery and protection of new vaccines and vaccine carriers, it has become clear that immunization with delivery mechanisms that do not involve living, replicating organisms are vastly preferred. In this report, non-replicating bacterial minicells simultaneously co-delivering the nucleoprotein (NP) of lymphocytic choriomeningitis virus (LCMV) and the corresponding DNA vaccine were tested for the ability to generate protective cellular immune responses in mice. It was found that good protection (89%) was achieved after intramuscular administration, moderate protection (31%) was achieved after intranasal administration, and less protection (7%) was achieved following gastric immunization.

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Interleukin-2 (IL-2) mediates cell cycle progression and antiapoptosis in human T cells via several signal transduction pathways. The Tax protein of the human T-cell leukemia virus type I (HTLV-1) deregulates cell growth and alters the role of IL-2 in infected cells. However, Tax-immortalized cells stay dependent on IL-2, suggesting that events besides HTLV-1 gene expression are required for leukemia to develop.

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