Publications by authors named "Yen Nguyen Thi Hai"

Article Synopsis
  • There is a crucial demand for improved biomarkers to detect early-stage breast cancer, and combining untargeted metabolomics and lipidomics with advanced data mining may lead to new discoveries.* -
  • This study utilized a multimodal omics approach to find and validate biomarkers that can distinguish between breast cancer patients and those with benign tumors, revealing specific lipid and metabolite changes associated with cancer.* -
  • The use of machine learning models showed promising results in differentiating cancerous from benign cases, highlighting the potential for metabolic biomarkers to enhance breast cancer screening, though further validation and development for clinical use are needed.*
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Two distinct defense strategies, disease resistance (DR) and disease tolerance (DT), enable a host to survive infectious diseases. Newborns, constrained by limited energy reserves, predominantly rely on DT to cope with infection. However, this approach may fail when pathogen levels surpass a critical threshold, prompting a shift to DR that can lead to dysregulated immune responses and sepsis.

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  • Cyclosporine A (CsA) is effective for immunity-related diseases but can be toxic to the liver, prompting research into its hepatotoxicity mechanisms.
  • This study used various data from humans, mice, and rats to analyze changes in gene expression and identify pathways affected by CsA over time, focusing on liver microtissues and tissues from different species.
  • Results highlighted specific up-regulated and down-regulated genes and pathways, indicating consistent biological changes across species, which aids in understanding CsA toxicity and advancing biomarker discovery.
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  • The text refers to a correction made to an article with the DOI 10.3389/fphar.2023.1156655.
  • This correction likely addresses inaccuracies or updates in the original publication.
  • The article is published in a pharmacology journal, suggesting it focuses on a topic related to pharmaceuticals or drug research.
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A better understanding of cyclosporine A (CsA)-induced nephro- and hepatotoxicity at the molecular level is necessary for safe and effective use. Utilizing a sophisticated study design, this study explored metabolic alterations after long-term CsA treatment in vivo. Rats were exposed to CsA with 4, 10, and 25 mg/kg for 4 weeks and then sacrificed to obtain liver, kidney, urine, and serum for untargeted metabolomics analysis.

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Uncontrolled blood pressure is a major risk factor for cardiovascular diseases. Fixed-dose combination (FDC) therapy offers a promising approach to addressing this challenge by providing a convenient single-tablet solution that enhances the effectiveness of blood pressure control. In our systematic review, we assess the effectiveness of perindopril/amlodipine FDC in managing blood pressure.

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The spread of tuberculosis (TB), especially multidrug-resistant TB and extensively drug-resistant TB, has strongly motivated the research and development of new anti-TB drugs. New strategies to facilitate drug combinations, including pharmacokinetics-guided dose optimization and toxicology studies of first- and second-line anti-TB drugs have also been introduced and recommended. Liquid chromatography-mass spectrometry (LC-MS) has arguably become the gold standard in the analysis of both endo- and exo-genous compounds.

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Tracking alterations in polar metabolite and lipid levels during anti-tuberculosis (TB) interventions is an emerging biomarker discovery and validation approach due to its sensitivity in capturing changes and reflecting on the host status. Here, we employed deep plasma metabolic phenotyping to explore the TB patient metabolome during three phases of treatment: at baseline, during intensive phase treatment, and upon treatment completion. Differential metabolites (DMs) in each period were determined, and the pathway-level biological alterations were explored by untargeted metabolomics-guided functional interpretations that bypassed identification.

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The ability of amphipathic peptides to arrange themselves in aqueous solutions, known as self-assembly, has been found to reduce the effectiveness of these peptides in interacting with cell membranes. Therefore, minimizing their tendency to self-assemble could be a potential strategy for enhancing the pharmacological properties of antimicrobial peptides (AMPs). To explore this idea, this study prepared a series of natural peptides () with increased net charge and hydrophilicity via alanine-to-lysine substitution and investigated the impact on the biological activity.

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Background: The optimal diagnosis and treatment of tuberculosis (TB) are challenging due to underdiagnosis and inadequate treatment monitoring. Lipid-related genes are crucial components of the host immune response in TB. However, their dynamic expression and potential usefulness for monitoring response to anti-TB treatment are unclear.

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var. (PVV) and var. (PVF) both belong to species and are chemically and morphologically similar, making it hard to distinguish for the consumer.

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Tacrolimus (TAC)-based treatment is associated with nephrotoxicity and hepatotoxicity; however, the underlying molecular mechanisms responsible for this toxicity have not been fully explored. This study elucidated the molecular processes underlying the toxic effects of TAC using an integrative omics approach. Rats were sacrificed after 4 weeks of daily oral TAC administration at a dose of 5 mg/kg.

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Altered lipid patterns in Caenorhabditis elegans (C. elegans) resulting from exposure to harmane remain to be explored. In this study, untargeted lipidomics was carried out to elucidate the effects of acute exposure to harmane on the lipidome of C.

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Article Synopsis
  • Type 2 diabetes significantly complicates the treatment and management of tuberculosis, highlighting the need to understand the metabolic changes in patients with both conditions.
  • The study utilized metabolomics and lipidomics to analyze plasma profiles of patients with tuberculosis and those with tuberculosis and diabetes (TB-DM), identifying distinct biological processes and biomarkers between the two groups.
  • Findings revealed elevated bile acids and carbohydrate-related molecules in TB-DM, along with a reduction in certain metabolites, providing insights that could lead to improved treatment strategies for managing TB in diabetic patients.
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In this study, we investigated the lipidome of tuberculosis patients during standard chemotherapy to discover biosignatures that could aid therapeutic monitoring. UPLC-QToF MS was used to analyze 82 baseline and treatment plasma samples of patients with pulmonary tuberculosis. Subsequently, a data-driven and knowledge-based workflow, including robust annotation, statistical analysis, and functional analysis, was applied to assess lipid profiles during treatment.

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The mechanism of indomethacin toxicity at the systemic level is largely unknown. In this study, multi-specimen molecular characterization was conducted in rats treated with three doses of indomethacin (2.5, 5, and 10 mg/kg) for 1 week.

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The impact of high siltation and accumulation of organic and waste material in the intertidal of the dammed Ba Lai River in Vietnam as part of the Mekong estuarine system was investigated by means of marine free-living nematodes. Nutrients content (nitrate, ammonium, total phosphorus, total nitrogen), total suspended solids, total organic carbon, coliform, bacteria E. coli, pH, dissolved oxygen, total dissolved solids, methane and hydrogen sulfide concentration, and the nematode communities were characterized in sediment at selected stations along the river above and below the dam.

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Despite remarkable success in the prevention and treatment of tuberculosis (TB), it remains one of the most devastating infectious diseases worldwide. Management of TB requires an efficient and timely diagnostic strategy. In this study, we comprehensively characterized the plasma lipidome of TB patients, then selected candidate lipid and lipid-related gene biomarkers using a data-driven, knowledge-based framework.

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  • Drug-induced nephrotoxicity is a common issue, but the exact mechanisms of how certain medications cause kidney damage remain unclear.
  • In a study using rats, researchers conducted a genome-wide analysis to identify pathways linked to the toxicity of four drugs: colistin, ifosfamide, indomethacin, and puromycin.
  • Results showed that these drugs mainly affected pathways related to cell death and metabolism in the kidneys, with some overlapping effects on the liver; the study suggests further research into combination therapies to reduce toxicity while maintaining drug effectiveness.
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The mechanisms underlying colistin-induced toxicity are not fully understood. This study used untargeted metabolomics and transcriptomics to elucidate the molecular processes occurring in the liver and kidney of rats after treatment with colistin methanesulfonate (CMS). Rats were treated with 50 mg/kg CMS (high-dose), 25 mg/kg CMS (low-dose), or vehicle control, either as a single dose or once daily for 1 or 4 weeks.

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The clinical utility of blood transcriptomic biosignatures for the treatment monitoring and outcome prediction of tuberculosis (TB) remains limited. In this study, we aimed to discover and validate biomarkers for pulmonary TB treatment monitoring and outcome prediction based on kinetic responses of gene expression during treatment. In particular, differentially expressed genes (DEGs) were identified by time-series comparison.

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To investigate the relationship between sex-composition of children and women's fertility desire in Vietnam. Using data from the 2014 Vietnam Multiple Indicator Cluster Survey (MICS), we investigate the association between sex composition of children and desire for additional children among women in reproductive age (15 to 49 years) across Vietnam (N=5,605). Multivariate logistic regression models showed statistically significant association between sex composition of children and women's fertility desire, after controlling for social norms of fertility preference, demographic and socioeconomic factors.

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Scrub typhus is an acute febrile disease caused by infection. Despite the wide range of approaches explored during the last seventy years, an effective prophylactic vaccine is not yet available. Here, we developed a novel recombinant antigen derived from conserved regions of 56 kDa type-specific antigen (TSA56), a major outer membrane protein responsible for genetic heterogeneity and antigenicity, and evaluated it as a protective vaccine antigen.

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Despite the various roles of type I interferon (type I IFN) responses during bacterial infection, its specific effects have been poorly characterized in scrub typhus caused by infection. Here, we show that type I IFNs are primarily induced via intracellular nucleic acids sensors, including RIG-I/MAVS and cGAS/STING pathways, during invasion. However, type I IFN signaling did not significantly affect pathogenesis, mortality, or bacterial burden during primary infection , when assessed in a mice model lacking a receptor for type I IFNs (IFNAR KO).

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