Angew Chem Int Ed Engl
May 2024
In a recent communication (Angew. Chem. Int.
View Article and Find Full Text PDFRealization of planar tetracoordinate arrangements of nitrogen atoms is challenging because their preference for localized bonding (caused by its high electronegativity) makes them typically tricoordinate. This is especially true for the more electronegative oxygen atoms. Herein, we computationally designed two clusters NBe4H4- and OBe4H4; they contain a planar tetracoordinate nitrogen (ptN) and planar tetracoordinate oxygen (ptO) atom, respectively.
View Article and Find Full Text PDFIt is highly challenging to control (stop and resume as needed) molecular rotors because their intramolecular rotations are electronically enabled by delocalized σ bonding, and the desired control needs to be able to destroy and restore such σ bonding, which usually means difficult chemical manipulation (substitution or doping atom). In this work, we report CBeH, a molecular rotor that can be controlled independently of chemical manipulation. This molecule exhibited the uninterrupted free rotation of Be and H atoms around the central carbon in first-principles molecular dynamics simulations at high temperatures (600 and 1000 K), but the rotation cannot be witnessed in the simulation at room temperature (298 K).
View Article and Find Full Text PDFChem Commun (Camb)
January 2024
Replacing one of the peripheral Se with a Se bridge is an effective strategy to flatten the CBSe cluster. The global minimum of CB4Se contains one fan-shaped planar tetracoordinate carbon (ptC) CB core, possessing double 2π + 6σ aromaticity. The peripheral Se bridge is dexterous and crucial for the stability of CBSe.
View Article and Find Full Text PDFSingle-molecule nanorotors are generally constructed based on boron atoms to obtain structural fluxionality via possessing the delocalized multicenter bonds. However, the electron-deficient boron atoms are commonly exposed in these nanorotors, which leads to extremely high chemical reactivity, which blocks the synthesis in the condensed phase. In this work, we computationally designed a series of transition-metal-doped boron oxide clusters MBO (in structural configuration of [(OB)-M©BO-BO], M = Mn, Tc, Re, © means "centered" in a planar or quasi-planar hypercoordinate environment), which can be vividly named as "ballet rotors" to label their anthropomorphic dynamic rotational behaviors.
View Article and Find Full Text PDFAchieving a planar hypercoordinate arrangement of s-block metals through covalent bonding with ligands is challenging due to the strong ionicity involved. Herein, we report the first case of a neutral binary global minimum containing a planar hexacoordinate beryllium atom. The central Be atom is coordinated by six active Be atoms, the latter in turn are enclosed by an equal number of more electronegative chlorine atoms in the periphery, forming a star-like phBe cluster (Be©Be Cl ).
View Article and Find Full Text PDFSearching for the maximum coordination number (CN) in planar species with novel bonding patterns has fascinated chemists for many years. Using the experimentally observed polyynic cyclo[18]carbon C and theoretically predicted polyynic cyclo[14]carbon C as effective ligands and based on extensive first-principles theory calculations, we predict herein their perfect planar alkaline-metal-centered complexes Cs©C (1) and Na©C (4) which as the global minima of the systems possess the record coordination numbers of CN = 18 and 14 in planar polyynic species, respectively. More interestingly, detailed energy decomposition and adaptive natural density partitioning bonding analyses indicate that the hypercoordinate alkaline-metal centers in these complexes exhibit obvious transition metal behaviors, with effective in-plane (π-6s)σ, (π-7p)σ, and (π-5d)σ coordination bonds formed in Cs©C (1) and (π-3s)σ, (π-3p)σ, and (π-3d)σ coordination interactions fabricated in Na©C (4) to dominate the overall attractive interactions between the metal center and its cyclo[]carbon ligand.
View Article and Find Full Text PDFThe solvent effects in Diels-Alder cycloadditions were studied by using molecular dynamics simulations with explicit molecular treatments for both substrates and solvents. Energy decomposition analysis was used to investigate the role of H-bonding networks of hexafluoroisopropanol solvent in promoting both reactivity and regioselectivity.
View Article and Find Full Text PDFThe design of clusters featuring non-classical planar hypercoordinate atoms (phAs) often depends on the delocalized multicenter bonds involving reactive electron-deficient elements, which both destabilize the clusters and lead to difficulty in achieving the phA arrangement for electronegative elements such as nitrogen due to their preference for localized bonds. In this work, we computationally designed a series of aluminum chalcogenide clusters NAlX (X = S, Se, Te) with a desired planar tetracoordinate nitrogen and meaningfully improved chemical stability, as evidenced by the wide gaps (6.51-7.
View Article and Find Full Text PDFIn designing three-dimensional (3-D) molecular stars, it is very difficult to enhance the molecular rigidity through forming the covalent bonds between the axial and equatorial groups because corresponding axial groups will generally break the delocalized π bond over equatorial frameworks and thus break their star-like arrangement. In this work, exemplified by designing the 3-D stars Be ©Be E (E = Au, Cl, Br, I) with three delocalized σ bonds and delocalized π bond over the central Be ©Be moiety, we propose that the desired covalent bonding can be achieved by forming the delocalized σ bond(s) and delocalized π bond(s) simultaneously between the axial groups and equatorial framework. The covalency and rigidity of axial bonding can be demonstrated by the total Wiberg bond indices of 1.
View Article and Find Full Text PDFNon-spherical distributions of ligand atoms in coordination complexes are generally unfavorable due to higher repulsion than for spherical distributions. To the best of our knowledge, non-spherical heptagonal bipyramidal nonacoordination is hitherto unreported, because of extremely high repulsion among seven equatorial ligand atoms. Herein, we report the computational prediction of such nonacoordination, which is constructed by the synergetic coordination of an equatorial hepta-dentate centripetal ligand (BO) and two axial mono-dentate ligands (-BO) in the gear-like mono-anionic complexes [OB-M©BO-BO] (M = Fe, Ru, Os).
View Article and Find Full Text PDFThe origins of ligand effects on PhCF reductive elimination from Pd complexes were computationally investigated by using energy decomposition analysis. The results indicate weak electrostatic interactions between ligands and Ph-Pd-CF lead to small barriers of PhCF reductive elimination. Two major factors affecting the electrostatic interactions are identified.
View Article and Find Full Text PDFThe solvent effects in Friedel-Crafts cycloalkylation of epoxides and Cope rearrangement of aldimines were investigated by using ab initio molecular dynamics simulations. Explicit molecular treatments were applied for both reactants and solvents. The reaction mechanisms were elucidated via free energy calculations based on metadynamics simulations.
View Article and Find Full Text PDFThe origins of regioselectivity in Ni-catalyzed alkene hydrofunctionalizations were computationally investigated by using energy decomposition analysis. The results indicate the Markovnikov selectivity with aryl-substituted alkenes is favored due to the stabilizing charge transfer effect, and the anti-Markovnikov selectivity with alkyl-substituted alkenes is favored because of the destabilizing Pauli repulsion effect.
View Article and Find Full Text PDFThe origins of the reactivity of strain-increase allylborations were computationally investigated. The low reactivity of vinylcyclopropyl boronates is due to weak electronic interactions between benzaldehyde and allylboronates. By increasing the acidity of the boron center, the reactivity is significantly improved because the stronger stabilizing O→B interaction effectively compensates for destabilizing steric effects.
View Article and Find Full Text PDFNBeH ( = 0-5) (0A-5A) species with a novel planar pentacoordinate nitrogen (ppN) were designed by the isoelectronic substitution of the C atom in planar pentacoordinate carbon (ppC) species CBeH ( = 0-5) with an N atom. The highly flexible H atoms found in ppC species CBeH and CBeH were fixed upon the nitrogen substitution, as mirrored by the non-flexible H atoms in their ppN analogues NBeH (2A) and NBeH (3A). Moreover, the N atom was found to fit the H-surrounded Be rings better than the C atom because the ppC species CBeH and CBeH adopted non-planar structures due to size-mismatch between the C atom and the H-surrounded Be ring, but their ppN analogues NBeH (4A) and NBeH (5A) adopted perfect planar structures.
View Article and Find Full Text PDFChem Commun (Camb)
February 2022
The mechanism and origin of ligand effects on stereoinversion of Pd-catalyzed synthesis of tetrasubstituted olefins were investigated using DFT calculations and the approach of energy decomposition analysis (EDA). The results reveal that the stereoselectivity-determining steps are different when employing different phosphine ligands. This is mainly due to the steric properties of ligands.
View Article and Find Full Text PDFChem Commun (Camb)
December 2021
The mechanism and origin of stereoselectivity of silver-catalyzed hydroalkylation of alkynes were computationally investigated at the B3LYP-D3BJ/6-311+G(d,p)-SDD//B3LYP/6-31G(d)-LANL2DZ level. The complex of alkynyl trialkylboronate with cationic silver is a key intermediate, which triggers the rate- and stereoselectivity-determining 1,2-migration step. Energy decomposition analysis indicates that the difference of Pauli repulsion dominates the stereoselectivity.
View Article and Find Full Text PDFWe predicted the stable alkaline earth complexes M(Cp)3- (M = Ca, Sr, Ba; Cp = cyclopentadienyl), where the M centers were in their stable +2 oxidation state and mimicked the bonding behaviour of transition metals by participating in bonding with the π orbitals of Cp ligands using their d orbitals.
View Article and Find Full Text PDFElectrons can be accelerated to GeV energies with high collimation via laser wakefield acceleration in the bubble regime and emit bright betatron radiation in a table-top size. However, the radiation brightness is usually limited to the third-generation synchrotron radiation facilities operating at similar photon energies. Using a two-stage plasma configuration, we propose a novel scheme for generating betatronlike radiation with an extremely high brilliance.
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