Publications by authors named "Yılmaz E"

The presence of microplastics (MPs) in aquatic ecosystem has become a pressing global concern. MPs pose a significant threat to aquatic ecosystems, with devastating consequences for both aquatic life and human health. Notably, freshwater ecosystems are particularly vulnerable to MPs pollution.

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Background: APOEε4 significantly increases the risk of developing Alzheimer's disease (AD). Cognitively healthy APOEε4-carriers exist, suggesting potential protective mechanisms against APOEε4. We hypothesized that some APOEε4-carriers may have genetic variations protecting them from developing APOEε4-mediated AD pathology.

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Background: Genetic variations have emerged as crucial players in the etiology of Alzheimer's disease (AD), and they serve for a better understanding of the disease mechanisms; yet the specific roles of these genetic variants remain uncertain. Animal models with reminiscent disease pathology could uncover previously uncharacterized roles of these genes. Therefore, we generated zebrafish models for AD variants to analyze the in depth molecular and biological functions of these variants.

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This study aimed to examine the extraction of specific phenolic compounds from blackthorn using ultrasound-assisted extraction (UAE) and to evaluate the influence of UAE on the phenolic composition, bioaccessibility, and cytotoxic effect evaluated on ovarian cancer (OVCAR-3 and SKOV-3) and healthy (HaCaT) cell lines. The UAE parameters were optimized by modeling with the response surface method. Temperature, time, and ultrasound amplitude were utilized to determine the optimal extraction conditions.

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Background: Owing to its high perishability, the market life of nectarine fruit is very short. Cold storage is a principal approach to limit post-harvest quality loss in nectarines. The objective of this research was to evaluate the impact of postharvest methyl jasmonate (MeJA), salicylic acid (SA) and 1-methylcyclopropene (1-MCP) on quality properties of nectarine fruit, specifically weight loss, firmness, phenolics and antioxidant activity, following cold storage and subsequent shelf life.

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Background: Intracranial hemorrhage (ICH) is reportedly rare but has high morbidity and mortality risk in persons with hemophilia. Although the risk factors that facilitate bleeding are known, the factors affecting the sequelae are not well known.

Objectives: We planned to investigate the risk factors for neurologic sequelae in children and adolescents with hemophilia suffering from ICH.

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Studies attempting to predict the development of severe respiratory failure in patients with a COVID-19 infection using machine learning algorithms have yielded different results due to differences in variable selection. We aimed to predict the development of severe respiratory failure, defined as the need for high-flow oxygen support, continuous positive airway pressure, or mechanical ventilation, in patients with COVID-19, using machine learning algorithms to identify the most important variables in achieving this prediction. This retrospective, cross-sectional study included COVID-19 patients with mild respiratory failure (mostly receiving oxygen through a mask or nasal cannula).

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Aim: This study examines the mediating role of attitude towards preventing pressure injuries (PIs) in the effect of knowledge about Medical Device-Related Pressure Injuries (MDRPI) on self-efficacy in PI management among Turkish intensive care unit (ICU) nurses.

Materials And Methods: A descriptive, cross-sectional study was conducted with 302 ICU nurses in Turkey from October 15, 2023, to April 30, 2024. Data were collected using the Nurse Information Form, Medical Device Related Pressure Injury Knowledge Assessment Test (MDRPI-KAT), Attitude towards Pressure Ulcer Prevention Instrument (APuP), and the Pressure Ulcer Management Self-Efficiency Scale (PUMSES).

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Pancreatic cancer is predicted to be the second highest cause of cancer deaths by 2030, with a mortality rate of 98 % and a 5-year survival rate of only 4-8 %. FOLFIRINOX which consists of four main ingredients has shown superior efficacy in treating patients with pancreatic cancer compared to other agents and combinations. However, toxicities have prevented full-dose use of FOLFIRINOX.

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Background: Childhood fractures are an important public health issue worldwide as they potentially lead to long-term complications. This is the first study reporting a nationwide data pool of 2 million children. We aimed to investigate the epidemiology of pediatric fractures by sex, age, geographical region, and socioeconomic status (SES).

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The BCR-ABL tyrosine kinase which is responsible for the pathogenesis of chronic myeloid leukemia (CML), has emerged as a promising therapeutic target. To address this issue, we employed a comprehensive computational approach integrating virtual screening, molecular dynamics (MD) simulations, and MM-GBSA (Molecular Mechanics/Generalized Born Surface Area) analysis to identify potential inhibitors and elucidate their binding mechanisms. Initially, virtual screening was conducted on 994 compounds from the ZINC database and, these compounds were docked against wildtype and T315I mutant ABL1 for the Type I and Type II ABL1 kinase inhibition mechanisms.

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Article Synopsis
  • The heart's proper functioning depends on both the central nervous system and its own local neuronal networks, known as the intracardiac nervous system (IcNS), which has not been thoroughly studied.
  • This research introduces a detailed classification of the IcNS by using advanced techniques like single-cell RNA sequencing, revealing a surprising variety of neuronal types within it.
  • Notably, some identified neurons share characteristics with pacemaker neurons from the central nervous system, highlighting the complexity of the IcNS and its crucial role in maintaining heart rhythm, paving the way for future research on cardiac-related issues.
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Recovery is a critical factor in athletic performance, and accelerating this process is essential to enable athletes to perform more effectively in both training load and competitive performance. After exercise, immediate recovery is potentially helpful for investigating autonomic activity levels, as they are definable with heart rate variability (HRV). The purpose of this study was to examine the effect of ten sessions of HRV-Biofeedback (HRV-BF) training on recovery process parameters after the aerobic performance.

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Very small superparamagnetic iron oxide nanoparticles (VSOPs) show diagnostic value in multiple diseases as a promising MRI contrast agent. Macrophages predominantly ingest VSOPs, but the mechanism remains unclear. This study identifies differences in VSOP uptake between pro-inflammatory M1 and anti-inflammatory M2 macrophages and explores the role of the pericellular glycocalyx.

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Objective: Postoperative junctional ectopic tachycardia (JET) is usually a self-limiting condition; however, when combined with atrioventricular dissociation and postoperative ventricular dysfunction, it may increase morbidity and mortality. This study aimed to determine the overall incidence of JET following congenital heart surgery, to identify patient and procedure-related risk factors, and to evaluate the clinical impact of JET on outcomes.

Methods: The records of 2,814 patients who underwent cardiac surgery over a five-year period were reviewed retrospectively to identify those with JET.

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Background: Understanding how governance factors such as democracy and corruption impact the healthcare workforce is crucial for achieving Universal Health Coverage (UHC). Effective health workforce planning and resource allocation are influenced by these political constructs. This study examines the relationship between democracy and corruption and key healthcare workforce metrics.

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A patient with left upper quadrant breast cancer who had 18F-FDG PET/CT imaging underwent 68Ga-Trivehexin PET/CT. 68Ga-Trivehexin PET/CT showed higher radiotracer accumulation in the primary tumor, left internal mammary lymph nodes, and axillary lymph nodes compared with 18F-FDG PET/CT. However, Trivehexin uptake was not observed in FDG-positive lymph nodes in the mediastinum and left hilar region.

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Article Synopsis
  • * Out of 44 patients, the procedure was successful in 43 cases (97.7%), with minimal complications, although one patient required surgery due to device embolization and significant tissue damage.
  • * Over a follow-up period of 43 months, AR worsened in only 1 patient, while it improved in several others, showing that transcatheter closure is a safe and effective treatment method for these conditions.
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  • SARS-CoV-2 enters human cells through its spike protein, mainly binding to ACE2 receptors, which leads to viral replication and an overstimulated immune response known as a cytokine storm.
  • This study investigated the expression of vimentin, a protein linked to endothelial dysfunction and fibrosis, in severe COVID-19 patients, those recovering, and healthy controls.
  • Results showed that severe COVID-19 patients had higher vimentin levels and gene expression compared to healthy individuals, while N-cadherin levels were lower, suggesting these proteins could serve as potential diagnostic markers for the disease.
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Article Synopsis
  • - The study identifies a new diatom species from the highly alkaline Lake Van in Turkey, characterized through light and scanning electron microscopy on both wild and cultivated samples.
  • - Genome analysis revealed that the two monoclonal cultures have very similar DNA sequences with only a few mutations, particularly in the mitochondrial and plastid genomes, indicating some differences in protein coding genes.
  • - Phylogenetic analysis placed the new diatom species within the K clade, known for its diversity of species from hypersaline to freshwater environments.
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  • Prostate MRI is crucial for diagnosing prostate cancer but can be complicated by benign conditions that look like cancer on scans.
  • The review discusses various benign prostate issues, including anatomical variations and inflammatory conditions, that can be misinterpreted as malignancy.
  • It highlights the importance of high-quality MRI for accurate diagnosis and the potential of artificial intelligence to improve image analysis.
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Purpose: To develop and evaluate a multimodal approach including clinical parameters and biparametric MRI-based artificial intelligence (AI) model for determining the necessity of prostate biopsy in patients with PI-RADS 3 lesions.

Methods: This retrospective study included a prospectively recruited patient cohort with PI-RADS 3 lesions who underwent prostate MRI and MRI/US fusion-guided biopsy between April 2019 and February 2024 in a single institution. The study examined demographic data, PSA and PSA density (PSAD) levels, prostate volumes, prospective PI-RADS v2.

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