Publications by authors named "Xuemin Cheng"

We extend the design methodology for stabilized zoom systems by analyzing the stable convergence of singular points in the solution region for image plane shift compensation and continuous zooming. Using lens group magnification as key parameters, we analyze the stability of singular points related to the descending gradient of the zoom equation and the positions of extremum points within the solution region. These singular points and their solution regions are identified and correspond to solutions of specific optical path structures.

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Peptidyl arginine deiminases (PADs) are important enzymes in many diseases, especially those involving inflammation and autoimmunity. Despite many years of effort, developing isoform-specific inhibitors has been a challenge. We describe herein the discovery of a potent, noncovalent PAD2 inhibitor, with selectivity over PAD3 and PAD4, from a DNA-encoded library.

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Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1) has emerged as a promising therapeutic target for cancer treatment. However, the current PIN1 inhibitors have shown limited efficacy in animal models, leaving the question of whether PIN1 is a proper oncologic target still unanswered. By screening a 1 trillion DNA-encoded library (DEL), we identified novel nonacidic compounds.

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In practical engineering, the working conditions of gearbox are complex and variable. In varying working conditions, the performance of intelligent fault diagnosis model is degraded because of limited valid samples and large data distribution differences of gearbox signals. Based on these issues, this research proposes a gearbox fault diagnosis method integrated with lightweight channel attention mechanism, and further realizes the cross-component transfer learning.

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Article Synopsis
  • This study investigates dental fluorosis (DF) caused by excess fluoride and its link to changes in the intestinal microbiome.
  • A pilot study with 23 children in China found significant differences in gut microbiome composition between those with DF and a control group, particularly notable in specific bacterial groups.
  • Experiments in rats confirmed that fluoride affects gut microbiota and associated metabolites, suggesting that DF's pathogenesis is related to shifts in intestinal microorganisms involved in metabolic pathways.
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The proteolysis targeting chimera (PROTAC) strategy results in the down-regulation of unwanted protein(s) for disease treatment. In the PROTAC process, a heterobifunctional degrader forms a ternary complex with a target protein of interest (POI) and an E3 ligase, which results in ubiquitination and proteasomal degradation of the POI. While ternary complex formation is a key attribute of PROTAC degraders, modification of the PROTAC molecule to optimize ternary complex formation and protein degradation can be a labor-intensive and tedious process.

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Ghost imaging (GI) possesses significant application prospects in scattering imaging, which is a classic example of underdetermined conversion problem in optical field. However, even under the framework of single-pixel imaging (SPI), a challenge remains unresolved, i.e.

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We describe a novel approach for screening fragments against a protein that combines the sensitivity of DNA-encoded library technology with the ability of fragments to explore what will bind. Each of the members of the library consists of a fragment which is linked to a photoactivatable diazirine moiety. Split and pool synthesis combines each fragment with a set of linkers with the version of the library reported here containing some 70k different compounds, each with an individual DNA code.

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DNA-encoded library (DEL) technology is a powerful tool for small molecule identification in drug discovery, yet the reported DEL selection strategies were applied primarily on protein targets in either purified form or in cellular context. To expand the application of this technology, we employed DEL selection on an RNA target HIV-1 TAR (trans-acting responsive region), but found that the majority of signals were resulted from false positive DNA-RNA binding. We thus developed an optimized selection strategy utilizing RNA patches and competitive elution to minimize unwanted DNA binding, followed by k-mer analysis and motif search to differentiate false positive signal.

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Article Synopsis
  • The study aimed to identify independent risk factors for esophageal cancer-related ischemic stroke (ECIS) and to create an index to help doctors recognize high-risk patients.
  • Researchers analyzed clinical data from 91 patients with ECIS and 91 matched patients with active esophageal cancer but without stroke, focusing on factors like carcinoembryonic antigen levels, D-dimer, and neutrophil count as potential risk indicators.
  • The findings suggested that elevated levels of these markers could help differentiate ECIS from other ischemic strokes, and the new ECIS index could improve patient assessment in clinical settings.
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Livestock farms are recognized as the main sources of antibiotic resistance genes (ARGs) and antibiotic-resistant bacteria (ARB) with potential implications for human health. In this study, we systematically analyzed microbiome composition, distribution of ARGs and mobile genetic elements (MGEs) in the oropharynx and gut of workers in cattle farms and surrounding villagers, cattle feces and farm air, and the relationship of microbial communities among farm air, cattle feces and farmworkers (oropharynx and gut). Exposure to the farm environment may have remodeled farmworkers' oropharynx and gut microbiota, with reduced microbial diversity (P < 0.

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We have developed a graph-based Variational Autoencoder with Gaussian Mixture hidden space (GraphGMVAE), a deep learning approach for controllable magnitude of scaffold hopping in generative chemistry. It can effectively and accurately generate molecules from a given reference compound, with excellent scaffold novelty against known molecules in the literature or patents (97.9% are novel scaffolds).

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Sirtuin 1 (SIRT1), the NAD-dependent histone deacetylase, has been extensively investigated due to its cognitive protective effect. Studies suggest microRNAs (miRNAs) and histone modifications are key epigenetic regulators of gene expression and play important role in brain development. We previously showed that cognitive impairment by lead (Pb) was associated with downregulation of SIRT1, but the epigenetic role of this is unclear.

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Article Synopsis
  • Antibiotics used in the breeding industry can contaminate the environment, promoting the spread of antibiotic resistance genes (ARGs), with aerosol transmission being a key but often ignored factor.
  • A study conducted on a chicken farm in Henan Province analyzed 107 ARG subtypes and nine mobile genetic elements across three environments: chicken cloaca, aerosols, and human nasopharynx.
  • The findings revealed a significant concentration of bacteria in aerosols, similarities in microbial communities between chicken cloaca and human samples, and an overall consistency in ARG distribution, indicating the influence of animal breeding on both the environment and human health through aerosol pathways.
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This study examined the neuroprotective properties of resveratrol (Res) and its target sirtuin1 (SIRT1) against lead (Pb)-mediated toxicity and discovered that both resveratrol treatment and SIRT1 overexpression restored blocked autophagic flux as well as reduced β-amyloid (Aβ) contents. Four-week-old male C57BL/6 mice were employed to consumed 0.2% Pb(Ac) solution or deionized water for 3 months followed by 12 months of Res (50 mg/kg BW) or vehicle gavage.

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Lead (Pb) exposure damages synaptic structural plasticity that results in cognitive impairment. Resveratrol, a natural polyphenolic compound, is one of the most potent agonists of silencing information regulator 1 (SIRT1) discovered to date. However, the effects of SIRT1 on synaptic functional plasticity in early life Pb exposure are not well studied.

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The description of deformable mirror (DM) surface, which is usually a complex freeform surface, affects the measurement speed and accuracy in a real-time interferometric measurement system with a DM as the dynamic compensator. We propose an accurate and fast description method with automatically configurable Gaussian radial basis function. The distribution and shape factors of GRBFs are related to the complexity of the surface with sufficient flexibility to improve the accuracy, and the fitting results are automatically obtained using a traversal optimization algorithm, which can improve the fitting speed by reducing the number of time-consuming calculations.

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Lead (Pb) poses a potential environmental risk factor for cognitive dysfunction during early life and childhood. Resveratrol is considered a promising antioxidant with respect to the prevention of cognitive deficits and act as a potent SIRT1 agonist. Herein, this study aims to investigate the profile of neurogenesis markers following Pb exposure and to determine the regulatory role of resveratrol in this process.

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Stabilized zoom systems possess the advantages such as the simplified system layout, improved system stability, enhanced imaging performance, and a high zoom speed. The complex system design to achieve high performances requires calculations or investigations of the initial system for optimization and improvements, and thus, specific design techniques are pursued. In this study, we propose an automatic optical design scheme of synthetic characteristics for the off-axis stabilized zoom systems, which using focal length variable (FLV) opto-electronic elements and with a high zoom ratio.

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Background: The intellectual loss induced by fluoride exposure has been extensively studied, but the association between fluoride exposure in different susceptibility windows and children's intelligence is rarely reported. Hence, we conducted a cross-sectional study to explore the association between fluoride exposure in prenatal and childhood periods and intelligence quotient (IQ).

Methods: We recruited 633 local children aged 7-13 years old randomly from four primary schools in Kaifeng, China in 2017.

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A DNA-encoded chemical library (DECL) is built with combinatorial chemistry, which works by bringing chemical fragments together to generate diverse structures. However, chemical diversity of DNA-encoded chemical libraries is often limited by DNA compatible synthetic reactions. This report shows a conceptual strategy to expand chemical space of DNA-encoded chemical libraries by incorporation of diversity-oriented synthesis in DECL synthesis.

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Two novel compounds were identified as Naa50 binders/inhibitors using DNA-encoded technology screening. Biophysical and biochemical data as well as cocrystal structures were obtained for both compounds ( and ) to understand their mechanism of action. These data were also used to rationalize the binding affinity differences observed between the two compounds and a MLGP peptide-containing substrate.

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In this study, we propose a method for training convolutional neural networks to make them identify and classify images with higher classification accuracy. By combining the Cartesian and polar coordinate systems when describing the images, the method of recognition and classification for plankton images is discussed. The optimized classification and recognition networks are constructed.

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Excessive exposure to fluoride has been reported to affect bone mineral density (BMD). CALCA expression plays a critical part in bone formation. However, the role of CALCA in the association between fluoride and BMD is not known.

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