Publications by authors named "Xu Nan"

Nonstructural protein 3C, a master protease of Picornaviridae, plays a critical role in viral replication by directly cleaving the viral precursor polyprotein to form the viral capsid protein and antagonizing the host antiviral response. Additionally, 3C protease, as a tool enzyme, is involved in regulating polyprotein expression. Here, the 3C mutant gene (3Cm), fused with a small ubiquitin-like modifier (SUMO) tag at the N-terminal and featuring a mutation at position 127, was inserted into the cold-shock plasmid pCold of Escherichia coli for expression.

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Relapsed or refractory T-cell acute lymphoblastic leukemia/lymphoma (r/r T-ALL/LBL) are frequently aggressive and associated with unfavorable prognoses. Pan-targeted Chimeric Antigen Receptor (CAR) T-cell therapy have shown promising results in clinical trials. In recent years, CD7 CAR T-cell and CD5 CAR T-cell demonstrate effectiveness in treating r/r T-ALL/LBL patients with bone marrow infiltration.

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Introduction: Osteoporosis is an osteolytic disorder resulting from an inequilibrium between osteoblast-mediated osteogenesis and osteoclast-driven bone absorption. Safe and effective approaches for osteoporosis management are still highly demanded.

Purpose: This study aimed to examine the osteoprotective effect and the mechanisms of phaseol (PHA) in vitro and in vivo.

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Programmed cell death (PCD) and circular RNA (circRNA) have been found to involve in the pathogenesis of rheumatoid arthritis (RA). The aim of this study was to explore PCD mechanisms and gene regulatory networks in RA. RA related to circRNA, mRNA and single-cell data sets were obtained from the GEO database.

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Microglia play a dual role in neuroinflammatory disorders that affect millions of people worldwide. These specialized cells are responsible for the critical clearance of debris and toxic proteins through endocytosis. However, activated microglia can secrete pro-inflammatory mediators, potentially exacerbating neuroinflammation and harming adjacent neurons.

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Machine-learned potentials (MLPs) have exhibited remarkable accuracy, yet the lack of general-purpose MLPs for a broad spectrum of elements and their alloys limits their applicability. Here, we present a promising approach for constructing a unified general-purpose MLP for numerous elements, demonstrated through a model (UNEP-v1) for 16 elemental metals and their alloys. To achieve a complete representation of the chemical space, we show, via principal component analysis and diverse test datasets, that employing one-component and two-component systems suffices.

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Low-temperature chemical vapor deposition growth of graphene films is a long-term pursuit in the graphene synthesis field because of the low energy consumption, short heating-cooling process and low wrinkle density of as-obtained films. However, insufficient energy supply at low temperature (below 850 °C) usually leads to the difficulty in carbon source dissociation, graphene growth, and defect healing. Herein, a Carbon-Oxygen (C─O) radical assisted strategy is proposed for low-temperature growth of defect-free, wrinkle-free, and single-crystalline graphene films by using methanol precursor.

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Article Synopsis
  • Traditional snapshot techniques in long-wave infrared imaging lose significant optical energy due to the use of broadband filters, prompting the need for a more efficient solution.
  • The authors propose replacing these filters with specially designed diffractive elements optimized through a gradient descent algorithm, which improves optical energy efficiency by steering wavelengths to designated pixels.
  • A MST neural network is then employed to reconstruct spectral information, allowing for high-quality imaging and adaptability to changes in the image plane, as demonstrated through emulation experiments.
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Aiming at the problem that traditional network public opinion monitoring and searching are inefficient and can easily cause resource waste, the study firstly, through the dynamic deletion-shortest path algorithm to classify network text, and on this basis, innovatively constructs a text sentiment classification model based on the variant of convolutional neural network and recurrent neural network, and secondly, uses attention mechanism to classify the model. improvement of the classification model by using the attention mechanism. The research results show that the average precision rate, recall rate, and F-value of the dynamic deletion-shortest path algorithm are 97.

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Introduction: Alcohol consumption and hepatitis B virus (HBV) infection are common risk factors for hepatocellular carcinoma (HCC). However, few studies have focused on elucidating the mechanisms of HCC with combined alcohol and HBV etiology.

Objectives: We aimed to investigate the molecular features of alcohol and HBV on HCC and to seek out potential therapeutic strategies.

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Objective: Hepatocellular carcinoma (HCC) is a prevalent malignancy with poor survival. Different cell types in the tumor microenvironment participate in the tumorigenesis and progression of HCC. This study aimed to analyze the immune microenvironment of HCC and its relationship with clinical outcomes.

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Defect engineering in the inherently inert basal planes of transition metal dichalcogenides (TMDs), involving the introduction of chalcogen vacancies, represents a pivotal approach to enhance catalytic activity by exposing high-density catalytic metal single-atom sites. However, achieving a single-atom limit spacing between chalcogen vacancies to form ordered superstructures remains challenging for creating uniformly distributed high-density metal single-atom sites on TMDs comparable to carbon-supported single-atom catalysts (SACs). Here we unveil an efficient TMD-based topological catalyst for hydrogen evolution reaction (HER), featuring high-density single-atom reactive centers on a few-layer (7 × 7)-PtTe superstructure.

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Background: The identification of specific gene expression patterns is crucial for understanding the mechanisms underlying primary biliary cholangitis (PBC) and finding relevant biomarkers for diagnosis and therapeutic evaluation.

Aim: To determine PBC-associated hub genes and assess their clinical utility for disease prediction.

Methods: PBC expression data were obtained from the Gene Expression Omnibus database.

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Article Synopsis
  • * Co doping is applied to FeN to improve its work function, enhancing charge transfer and Li ion adsorption, resulting in better performance.
  • * The Co-FeN@C composite shows a significant increase in specific capacity and rate capability, making it a strong candidate for high-performance LIB anodes and offering a new way to develop efficient battery materials.
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Background: Previous studies have indicated that ψ-modified small RNAs play crucial roles in tumor metastasis. However, the ψ-modified small RNAs during metastasis of PTC are still unclear.

Methods: We compared the pseudouridine synthase 7 (PUS7) alteration between metastatic and non-metastatic PTCs, and investigated its correlation with clinicopathological features.

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Objectives: Ultrasound examination is a primary method for detecting thyroid lesions in clinical practice. Incorrect ultrasound diagnosis may lead to delayed treatment or unnecessary biopsy punctures. Therefore, our objective is to propose an artificial intelligence model to increase the precision of thyroid ultrasound diagnosis and reduce puncture rates.

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  • Severe cytokine release syndrome (sCRS) and immune effector cell-associated neurotoxicity syndrome (ICANS) hinder the use of CAR T-cell therapy, prompting researchers to develop a new CAR (ssCART-19) that incorporates shRNA to target the IL-6 gene.
  • In a study involving 87 patients with relapsed/refractory B-cell acute lymphoblastic leukemia, ssCART-19 demonstrated significantly lower rates of grade ≥3 CRS (14.89%) and ICANS (4.26%) compared to conventional CAR T-cells (cCART-19) which had rates of 37.5% and 15%, respectively.
  • Overall response rates and survival metrics were comparable
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  • Concentrated Growth Factor (CGF) is rich in CD34+ stem cells and is used for treating androgenetic alopecia and skin rejuvenation due to its immune-modulating effects, with potential applications for psoriasis, especially in patients who can't use biologics.
  • In a study, CD34+ stem cells from CGF were administered to androgenetic alopecia patients and psoriasis mouse models, showing a decrease in IL-17 levels and improved skin conditions, as assessed by various clinical and laboratory measures.
  • Results indicated that CGF reduces key inflammatory markers and enhances skin characteristics, leading to promising outcomes for psoriasis treatment, including significant improvement in a patient unresponsive to other therapies.
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  • - Malignant tumors of the digestive system historically have poor outcomes, with treatments like immunotherapy, radiotherapy, surgery, and chemotherapy showing limited success due to high rates of recurrence and metastasis.
  • - CAR-T cell therapy, a type of immunotherapy effective in blood cancers, struggles with challenges such as limited protein targets and issues infiltrating solid tumors, resulting in inadequate antitumor effects and side effects in digestive cancers.
  • - This analysis reviews recent advancements and challenges in CAR-T therapy for digestive cancers, focusing on antigen targets, the tumor microenvironment, and immune evasion, aiming to inspire further research in this area.
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  • This study compared two surgical methods for treating diffuse gliomas: the standard neuronavigation (NN)-guided approach versus a new multimodal-integrated method that combines intraoperative ultrasound and magnetic resonance imaging (IMRI) with NN.
  • Results showed that the multimodal-integrated surgery achieved gross total resection (GTR) in 69% of patients compared to only 43% in the NN-guided group, with a median extent of resection (EOR) of 100% versus 95%.
  • The new method also led to improved outcomes in larger and more complex tumors, suggesting that combining these imaging techniques enhances the effectiveness of surgeries for brain tumors.
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  • The study investigates the effects of perfluorooctane sulfonate (PFOS) and graphene oxide (GO) on apoptosis in adult marine medaka fish after chronic exposure to these substances in environmentally relevant concentrations.
  • Results showed increased oxidative stress and apoptosis indicators in fish, including heightened levels of reactive oxygen species (ROS) and activation of specific caspases, indicating harmful effects on fish health and growth.
  • The findings suggest that PFOS primarily drives the apoptosis process in the presence of GO due to competition for active sites on caspases, highlighting ecological risks associated with these contaminants in marine environments.
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Hepatocellular carcinoma (HCC) is a highly malignant tumor with significant global health implications. The role of CD4 T cells, particularly conventional CD4 T cells (Tconvs), in HCC progression remains unexplored. Furthermore, epigenetic factors are crucial in immune regulation, yet their specific role in HCC-infiltrating Tconv cells remains elusive.

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MATR3 is a nuclear matrix protein implicated in various cancers; however, its specific role in tumor progression remains unclear. The study utilized the TCGA database to reveal that MATR3 expression is upregulated in liver cancer and is correlated with poor prognosis. Functionally, MATR3 promoted liver cancer cell proliferation and metastasis.

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