Publications by authors named "Xing-Hua Zhang"

Monovalent salts are generally believed to stabilize DNA duplex by weakening inter-strand electrostatic repulsion. Unexpectedly, our force-induced hairpin unzipping experiments and thermal melting experiments show that LiCl, NaCl, KCl, RbCl, and CsCl at concentrations beyond ~1 M destabilize DNA, RNA, and RNA-DNA duplexes. The two types of experiments yield different changes in free energy during melting, while the results that high concentration monovalent salts destabilize duplexes are common.

View Article and Find Full Text PDF
Article Synopsis
  • Non-metallic catalysis is emerging as an effective approach for the hydrofunctionalization of unsaturated hydrocarbons, utilizing a unique BF·OEt-promoted method.
  • The study presents a highly selective and efficient multi-component reaction, characterized by a Markovnikov addition mechanism, validated through various experimental analyses.
  • Successful gram-scale application and exploration of drug derivatives indicate the potential of this method in developing new compounds, including one showing promise for anti-Parkinson's disease activity.
View Article and Find Full Text PDF
Article Synopsis
  • S-DNA is a specialized form of DNA that forms under high tension and is resistant to cleavage by certain enzymes like Cas12a and restriction endonucleases.* -
  • The researchers developed an assay using magnetic tweezers that allows for the separation of single-DNA molecules from multiple-DNA-tethered beads, enabling precise cleavage of only those that do not transition to S-DNA.* -
  • This innovative method enhances the accuracy of measuring DNA properties and cleavage rates, reducing errors often encountered in experiments involving multiple-DNA-tethered beads.*
View Article and Find Full Text PDF

The tethered molecule exhibits characteristics of both free and fixed states, with the electrodynamics involved in its diffusion, electrophoresis, and stretching processes still not fully understood. We developed a Single-Molecule Manipulation, Identification, and Length Examination (SMILE) system by integrating piezoelectric devices with nanopipettes. This system enabled successful capture and stretching of tethered double-stranded DNA within the nanopore.

View Article and Find Full Text PDF

The elasticities of double-stranded (ds) DNA and RNA, which are critical to their biological functions and applications in materials science, can be significantly modulated by solution conditions such as ions and temperature. However, there is still a lack of a comprehensive understanding of the role of solvents in the elasticities of dsRNA and dsDNA in a comparative way. In this work, we explored the effect of ethanol solvent on the elasticities of dsRNA and dsDNA by magnetic tweezers and all-atom molecular dynamics simulations.

View Article and Find Full Text PDF

Objectives: To observe the effect of heat-reinforcing needling (HRN) on synovial inflammation, hypoxia-inducible factor-1α (HIF-1α) and glycolytic activity in serum and synovial tissue in rabbits with cold syndrome of rheumatoid arthritis (RA), so as to explore its mechanisms underlying improvement of RA.

Methods: A total of 32 rabbits were randomly divided into normal, model, inhibitor and HRN groups, with 8 rabbits in each group. The RA with cold syndrome model was induced by injecting ovalbumin dry powder and Freund's complete adjuvant combined with cold freezing.

View Article and Find Full Text PDF

Objective: To observe the clinical efficacy of the combined treatment of Yishen Tongluo formula and low-dose tadalafil in diabetic erectile dysfunction.

Methods: A total of 80 patients with diabetic erectile dysfunction were randomly divided into two groups. The control group given tadalafil treatment, observation group in the control group given Yishen Tongluo Formula on the basis of treatment.

View Article and Find Full Text PDF

Introduction: Pancreatic cancer (PC) is among the deadliest malignancies. Kidney cancer (KC) is a common malignancy globally. Chemo- or radio-therapies are not very effective to control PC or KC, and overdoses often cause severe site reactions to the patients.

View Article and Find Full Text PDF
Article Synopsis
  • The study investigates the differences in bending stiffness between double-stranded RNA (dsRNA) and DNA (dsDNA), with a focus on the effect of ion distribution around their structures.
  • It finds that under physiological salt conditions, dsRNA is stiffer than dsDNA due to a sparser ion distribution around dsRNA's phosphate groups.
  • However, at high monovalent salt concentrations, both types exhibit similar bending stiffness because excess ions neutralize their phosphate groups, indicating that specific ionic environments significantly influence their biophysical properties.
View Article and Find Full Text PDF

Objective: To investigate the clinical effect of dumai (governor meridian) moxibustion combined with low-dose tadalafil in the treatment of ED with decline of vital gate fire.

Methods: We enrolled in this study 130 ED patients with decline of vital gate fire who met the inclusion criteria and equally randomized them into a control and an experimental group, the former treated with low-dose tadalafil tablets at 5 mg once a day while the latter by dumai moxibustion once a week in addition, all for 4 weeks. Of the total number of subjects, 62 in the control group and 63 in the experimental group completed the experiment.

View Article and Find Full Text PDF

The detection of nucleic acid sequences in parallel with the discrimination of single nucleotide variations (SNVs) is critical for research and clinical applications. A few limitations make the detection technically challenging, such as too small variation in probe-hybridization energy caused by SNVs, the non-specific amplification of false nucleic acid fragments and the few options of dyes limited by spectral overlaps. To circumvent these limitations, we developed a single-molecule nucleic acid detection assay without amplification or fluorescence termed THREF (hybridization-induced tandem DNA hairpin refolding failure) based on multiplexed magnetic tweezers.

View Article and Find Full Text PDF

Epithelial ovarian cancer (EOC) is the most common and fatal subtype of ovarian malignancies, with no effective therapeutics available. Our previous studies have demonstrated extraordinary suppressive efficacy of enterolactone (ENL) on EOC. A chemotherapeutic agent, trabectedin (Trabe), is shown to be effective on ovarian cancer, especially when combined with other therapeutics, such as pegylated liposomal doxorubicin or oxaliplatin.

View Article and Find Full Text PDF

Unlabelled: For mechanized maize production, a low grain water content (GWC) at harvest is necessary. However, as a complex quantitative trait, understand the genetic mechanism of GWC remains a large gap, especially in hybrids. In this study, a hybrid population through two environments including 442 F1 was used for genome-wide association analysis of GWC and the grain dehydration rate (GDR), using the area under the dry down curve (AUDDC) as the index.

View Article and Find Full Text PDF

Nucleic acid deformations play important roles in many biological processes. The physical understanding of nucleic acid deformation by environmental stimuli is limited due to the challenge in the precise measurement of RNA and DNA deformations and the complexity of interactions in RNA and DNA. Magnetic tweezers experiments provide an excellent opportunity to precisely measure DNA and RNA twist changes induced by environmental stimuli.

View Article and Find Full Text PDF
Article Synopsis
  • Research shows a link between colorectal cancer (CRC) and an imbalance in gut bacteria (microbial dysbiosis), highlighting potential benefits of restoring this balance for patients.
  • In a mouse model of CRC, fecal microbiota transplantation (FMT) from healthy mice significantly reversed the gut microbiota disorder and slowed cancer progression, improving survival rates.
  • FMT enhanced immune responses by increasing the presence of cancer-fighting immune cells and reducing immunosuppressive cells, while also regulating inflammatory cytokines that play a role in cancer development.
View Article and Find Full Text PDF

As a key dsDNA recognition receptor, cyclic guanosine monophosphate (GMP)-AMP synthase (cGAS) plays a vital role in innate immune responses. Activated cGAS, by sensing DNA, catalyzes the synthesis of the secondary messenger cyclic GMP-AMP (cGAMP), which subsequently activates downstream signaling to induce production of interferons and inflammatory cytokines. Here, we report Zyg-11 family member B (ZYG11B) as a potent amplifier in cGAS-mediated immune responses.

View Article and Find Full Text PDF

Objective: To observe the effects of heat-reinforcing needling on synovial inflammation and microRNA-155 (miR-155)/Toll-like receptor 4 (TLR4)/nuclear transcription factor-κB (NF-κB) signaling axis, so as to investigate its anti-inflammatory mechanism in rabbits with cold syndrome of rheumatoid arthritis (RA).

Methods: A total of 36 rabbits were randomly divided into normal, model, agonist, inhibitor, heat-reinforcing needling (HRN) and agonist+heat-reinforcing needling (A+HRN) groups, with 6 rabbits in each group. The RA with cold syndrome model was induced by injecting ovalbumin dry powder and Freund's complete adjuvant combined with cold freezing.

View Article and Find Full Text PDF

5-Methyl-cytosine (5mC) is one of the most important DNA modifications and plays versatile biological roles. It is well known that 5mC stabilizes DNA duplexes. However, it remains unclear how 5mC affects the kinetics of DNA melting and hybridization.

View Article and Find Full Text PDF

Objective: To observe the effects of heat-reinforcing needling on the expression of purinergic ligand-gated ion channel 7 receptor(P2X7R),Nodlike receptor protein 3(NLRP3) and Caspase-1 in synovium tissues of knee joint of rabbits with cold syndrome rheumatoid arthritis(RA),so as to explore the anti-inflammatory mechanism of heat reinforcing needling in the treatment of RA.

Methods: Thirty male New Zealand white rabbits were randomly divided into normal group, model group, reinforcing-reducing needling group(RRG), heat-reinforcing needling group(HRG), and antagonist group(AG), with 6 rabbits in each group.The model of cold syndrome RA was established by ovalbumin combined with Freund's adjuvant and cryogenic freezing.

View Article and Find Full Text PDF

Objective To investigate the impact of microvascular obstruction (MVO) on the global and regional myocardial function by cardiac magnetic resonance feature-tracking (CMR-FT) in ST-segment-elevation myocardial infarction (STEMI) patients after percutaneous coronary intervention.Methods Consecutive acute STEMI patients who underwent cardiac magnetic resonance imaging 1 - 7 days after successful reperfusion by percutaneous coronary intervention treatment were included in this retrospective study. Based on the presence or absence of MVO on late gadolinium enhancement images, patients were divided into groups with MVO and without MVO.

View Article and Find Full Text PDF

Background: Oesophageal replacement by colonic interposition remains a major challenge due to its complexity and high incidence of complications; here we applied the two-stage operation strategy to oesophageal replacement by colonic interposition in high-risk oesophageal cancer patients following gastrectomy.

Methods: We performed a retrospective analysis on the data of patients with a history of distal gastrectomy who underwent one-stage and two-stage oesophageal replacement by colonic interposition from February 2012 to February 2020, and explored the relationship between the staging strategy and postoperative outcomes.

Results: The clinical data of 93 patients were collected and analysed.

View Article and Find Full Text PDF

Background: Acute-on-chronic liver failure (ACLF) patients have high mortality in a short period of time. This study aimed to compare the prognosis of transplanted ACLF patients to that of nontransplanted ACLF patients and decompensated cirrhosis recipients.

Methods: Clinical data of 29 transplanted ACLF patients, 312 nontransplanted ACLF patients, and 60 transplanted decompensated cirrhosis patients were retrospectively collected.

View Article and Find Full Text PDF
Article Synopsis
  • The study investigates the paternal genetic structure of three isolated ethnic groups in Southwest China: Baima, Muya, and Kongge, using advanced genetic analysis techniques.
  • Researchers found distinct Y chromosome haplogroups among the groups, with Baima having 4, Muya 5, and Kongge 3, indicating varying genetic diversity.
  • The findings suggest that Kongge is genetically related to the Wa people, while Baima and Muya share close ties with Tibetan populations, enhancing the understanding of genetic relationships among Chinese ethnic minorities.
View Article and Find Full Text PDF

When stretched, both DNA and RNA duplexes change their twist angles through twist-stretch coupling. The coupling is negative for DNA but positive for RNA, which is not yet completely understood. Here, our magnetic tweezers experiments show that the coupling of RNA reverses from positive to negative by multivalent cations.

View Article and Find Full Text PDF

DNA deformations upon environmental changes, e.g., salt and temperature, play crucial roles in many biological processes and material applications.

View Article and Find Full Text PDF