Publications by authors named "Xiaohong Duan"

Histones play crucial roles in both promoting and repressing gene expression, primarily regulated through post-translational modifications (PTMs) at specific amino acid residues. Histone PTMs, including methylation, acetylation, ubiquitination, phosphorylation, lactylation, butyrylation, and propionylation, act as important epigenetic markers. These modifications influence not only chromatin compaction but also gene expression.

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Article Synopsis
  • - Fahr's syndrome is a rare neurodegenerative disorder with under-explored oral manifestations; this study examines the dental features and genetic aspects using a specific patient case and literature review.
  • - The examined patient exhibited several dental issues, including extra teeth, missing teeth, and enamel problems, but genetic testing did not identify known mutations linked to her conditions.
  • - A review of previous cases revealed that patients with Fahr's syndrome and related disorders share common oral problems, suggesting that dental anomalies may be significant features in understanding these conditions.
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Backgrounds: Crush syndrome (CS) is the leading cause of death after earthquakes, second only to direct trauma. Acute kidney injury (AKI) is the most severe complication of CS. Research based on the CS-AKI mouse model and kidney function assessment by glomerular filtration rate (GFR) helps to elucidate the pathogenesis of CS-AKI, which contributes to effective treatment measures.

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Aiming at the multi-objective vehicle path planning problem with time windows (VRPTW), a Spark-based parallel Adaptive Large Neighborhood Search algorithm (Spark-ALNS) is proposed to solve it. The main design of the 4-point strategy: (1) Design a new simulated annealing algorithm cooling strategy to achieve a better jump out of the local optimal solution. (2) Adopt CW initialization to accelerate the convergence speed.

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Aim: Aging and age-related diseases are an ever-increasing social and public health problem. Allostatic load (AL) shows great potential as an interdisciplinary tool for assessing the aging of human beings but as yet lacks investigation in animal models which is our study focus at.

Methods: Here a continuous study of AL was conducted on naturally aging rats.

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This study enrolled 60 patients aged 28 to 76 years who were oral malignancy undergoing radical surgery for more than 3 hours to assess the disinfection effect of povidone-iodine in oral and maxillofacial surgery which is a clean-contaminated wound. The authors collected and compared the sample from oral mucosa and counted the colony-forming units before disinfection, after disinfection for 10 minutes, 1, 2, 3, and 4 hours. The results showed that the oral bacterial colony-forming units significantly decreased after disinfecting with povidone-iodine and the effect existed for 2 hours and the colony-forming units of 3 hours after disinfection showed statistically significant increase.

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Vitamin D-dependent rickets (VDDR) is a group of genetic disorders characterized by early-onset rickets due to deficiency of active vitamin D or a failure to respond to activated vitamin D. VDDR is divided into several subtypes according to the corresponding causative genes. Here we described a new type of autosomal dominant VDDR in a Chinese pedigree.

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Background: Myoglobin (Mb) induced death of renal tubular epithelial cells (RTECs) is a major pathological factor in crush syndrome-related acute kidney injury (CS-AKI). It is unclear whether ferroptosis is involved and could be a target for treatment.

Purpose: This study aimed to evaluate the potential therapeutic effects of combining the natural small molecule rosemarinic acid (RA) and the iron chelator deferasirox (Dfe) on CS-AKI through inhibition of ferroptosis.

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Article Synopsis
  • Hybridization capture-based targeted next generation sequencing (NGS) is becoming crucial in cancer diagnostics, with DNA library preparation being key for quality data.
  • The study found that enzymatic fragmentation produced more artifact variants compared to sonication, with distinct types of sequencing errors identified for each method.
  • A new hypothesis model (PDSM) was proposed to explain these sequencing errors, and an algorithm was developed to filter out these artifacts for more reliable genomic analyses.
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  • Liver fibrosis, a severe liver disease complication resulting from excessive collagen buildup, lacks effective treatments, but an empirical formula called Fu-Gan-Wan (FGW) shows promise in reversing it.
  • The review aims to uncover the mechanisms by which FGW mitigates liver fibrosis, using various experimental setups including RNA sequencing and network pharmacology to analyze its effects.
  • Results reveal that FGW significantly reduces liver enzyme levels, collagen deposition, and various pro-fibrotic and inflammatory factors, with the NF-κB signaling pathway identified as a crucial target in FGW's therapeutic action against liver fibrosis.
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Astragaloside IV (AST) has been confirmed to have antiasthmatic effects. However, the underline mechanism is unclear. The study aimed to explore the treatment mechanism of AST based on autophagy of memory T cells.

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The microgravity conditions in outer space are widely acknowledged to induce significant bone loss. Recent studies have implicated the close relationship between gene and bone loss. Despite this, the role of in bone remodeling and its molecular mechanisms in microgravity have not been fully elucidated.

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  • The solute carrier family 4 (SLC4) proteins are crucial for transporting ions across cell membranes and play a role in various bodily functions, including ion transport and molecular signaling.
  • Deficiencies in SLC4 proteins can lead to multiple system diseases affecting major body systems like respiratory, digestive, and nervous systems, with no effective treatments available so far.
  • Current research highlights SLC4 proteins as potential therapeutic targets due to their involvement in tumor development, focusing on the diseases linked to their mutations, their physiological roles, and possible directions for future drug development.
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Background: Targeted next-generation sequencing (NGS) is a powerful and suitable approach to comprehensively identify multiple types of variants in tumors. RNA-based NGS is increasingly playing an important role in precision oncology. Both parallel and sequential DNA- and RNA-based approaches are expensive, burdensome, and have long turnaround times, which can be impractical in clinical practice.

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H subunit of V-ATPase (ATP6V1H) is specifically expressed in osteoclasts and its deficiency lead to osteoporosis. Our group previously found four intronic SNPs of ATP6V1H related to reduced bone mineral density, but the mechanisms was not clear. In this study, we found that the above four SNPs were located at lncRNA lnc-TCEA1-3 by using bioinformatics analysis.

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Mutations that activate oncogenes and deactivate tumor suppressor genes are widely recognized as significant contributors to cancer development. We investigated relationships between heavy metal exposure and the frequencies and types of gene mutations in patients with lung adenocarcinoma (LUAD) and colorectal cancer (CRC). Plasma concentrations of arsenic (As), cadmium (Cd), chromium (Cr), mercury (Hg), and lead (Pb) were measured using inductively coupled plasma mass spectrometry (ICPMS), and next-generation sequencing (NGS) of 1123 cancer-related genes was performed using the tumor tissues.

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Tooth eruption is an important and unique biological process during craniofacial development. Both the genetic and environmental factors can interfere with this process. Here we aimed to find the failure pattern of tooth eruption among five genetic diseases.

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Osteopetrosis is a group of genetic bone disorders characterized by increased bone density and defective bone resorption. Osteopetrosis presents a series of clinical manifestations, including craniofacial deformities and dental problems. However, few previous reports have focused on the features of craniofacial and dental problems in osteopetrosis.

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Amelogenesis imperfecta (AI) is one of the typical dental genetic diseases in human. It can occur isolatedly or as part of a syndrome. Previous reports have mainly clarified the types and mechanisms of nonsyndromic AI.

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Objective: This review aimed to summarize recent progress on syndromic dentin defects, promoting a better understanding of systemic diseases with dentin malformations, the molecules involved, and related mechanisms.

Subjects And Methods: References on genetic diseases with dentin malformations were obtained from various sources, including PubMed, OMIM, NCBI, and other websites. The clinical phenotypes and genetic backgrounds of these diseases were then summarized, analyzed, and compared.

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The solute carrier family 4 (SLC4) includes 10 members (SLC4A1-5, SLC4A7-11), which are expressed in multiple tissues in the human body. The SLC4 family members differ in their substrate dependence, charge transport stoichiometry and tissue expression. Their common function is responsible for the transmembrane exchange of multiple ions, which is involved in many important physiological processes, such as erythrocyte CO transport and the regulation of cell volume and intracellular pH.

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