Publications by authors named "Xiao-Di Tan"

Article Synopsis
  • Sepsis, a severe condition causing many deaths worldwide, requires effective biomarkers for predicting its progression to septic shock, which current methods have struggled to provide.
  • Researchers developed a machine learning model named SepxFindeR using data from several transcriptomics datasets to better distinguish between sepsis and septic shock.
  • The model identified six key genes related to immune response, demonstrating high accuracy in predicting disease stages, and allows for effective patient identification using blood samples.
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Article Synopsis
  • Autophagy is crucial for immune responses during sepsis, with macrophages playing essential roles in this process.
  • The study highlights the importance of p120-catenin in regulating autophagy within macrophages when exposed to endotoxins, revealing that depleting p120 leads to reduced autophagic activity and increased cell death.
  • The findings indicate that targeting p120 could be a promising strategy for developing new treatments for inflammatory diseases by balancing autophagy and apoptosis in macrophages.
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Microbiota and feeding modes influence the susceptibility of premature newborns to necrotizing enterocolitis (NEC) through mechanisms that remain unknown. Here, we show that microbiota colonization facilitated by breastmilk feeding promotes NOD-like receptor family CARD domain containing 5 (Nlrc5) gene expression in mouse intestinal epithelial cells (IECs). Notably, inducible knockout of the Nlrc5 gene in IECs predisposes neonatal mice to NEC-like injury in the small intestine upon viral inflammation in an NK1.

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The pathogenic outcome of enteric virus infections is governed by a complex interplay between the virus, intestinal microbiota, and host immune factors, with metabolites serving as a key mediator. Noroviruses bind bile acid metabolites, which are produced by the host and then modified by commensal bacteria. Paradoxically, bile acids can have both proviral and antiviral roles during norovirus infections.

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Apoptosis, inflammation, and wound healing are critical pathophysiological events associated with various liver diseases. Currently, there is a lack of in vivo approaches to study hepatocyte apoptosis-induced liver injury and repair. To address this critical knowledge gap, we developed a unique genetically modified mouse model, namely, 3-Transgene (Tg) with inducible Hepatocyte-Specific Apoptosis Phenotype (3xTg-iHAP) in this study.

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Background & Aims: Necrotizing enterocolitis (NEC) is a life-threatening disease affecting mostly the ileum of preemies. Intestinal epithelial cell (IEC) apoptosis contributes to NEC pathogenesis. However, how scattered crypt IEC apoptosis leads to NEC with excessive villus epithelial necrosis remains unclear.

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Article Synopsis
  • Noroviruses cause 685 million cases of acute gastroenteritis worldwide each year, significantly impacting children, with around 200 million pediatric cases and up to 200,000 deaths.
  • Children are more susceptible to severe infections due to the unique bile acid pool in newborns, influenced by their developing gut microbiota and immature metabolic pathways.
  • Research shows that microbiota-derived bile acids can protect infants from severe norovirus symptoms, while maternal bile acids can increase vulnerability; hence, targeting bile acid metabolism may reduce neonatal infection risk.
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Background: Recombinant human IGF-1/binding protein-3 (rhIGF-1/BP3) is currently being tested in phase II clinical trials in premature infants to prevent bronchopulmonary dysplasia, but its impact on the neonatal intestine remains unclear. The aim of this study was to determine whether rhIGF-1/BP3 protects against necrotizing enterocolitis (NEC) in mice and to investigate the mechanisms involved.

Methods: Neonatal mice were dam fed or injected intraperitoneally with rhIGF-1/BP3 (or vehicle) and submitted to an experimental NEC model.

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Clinical evidence indicates a connection between gut injuries, infections, inflammation, and an increased susceptibility to systemic inflammation. Nevertheless, the animal models designed to replicate this progression are inadequate, and the fundamental mechanisms are still largely unknown. This research explores the relationship between gut injuries and systemic inflammation using a Dextran Sulfate Sodium (DSS)-induced colonic mucosal injury mouse model.

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The present report summarizes the United States Department of Veterans Affairs (VA) field-based meeting titled "Modulating microbiome-immune axis in the deployment-related chronic diseases of Veterans." Our Veteran patient population experiences a high incidence of service-related chronic physical and mental health problems, such as infection, irritable bowel syndrome (IBS), inflammatory bowel disease (IBD), various forms of hematological and non-hematological malignancies, neurologic conditions, end-stage organ failure, requiring transplantation, and posttraumatic stress disorder (PTSD). We report the views of a group of scientists who focus on the current state of scientific knowledge elucidating the mechanisms underlying the aforementioned disorders, novel therapeutic targets, and development of new approaches for clinical intervention.

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In this study, we determined if B lymphocytosis may serve as a JDM biomarker for disease activity. Children with untreated JDM were divided into two groups based on age-adjusted B cell percentage (determined through flow cytometry): 90 JDM in the normal B cell group and 45 in the high B cell group. We compared through -testing the age, sex, ethnicity, duration of untreated disease (DUD), disease activity scores for skin (sDAS), muscle (mDAS), total (tDAS), CMAS, and neopterin between these two groups.

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The orexigenic hormone ghrelin and its receptor, growth hormone secretagogue receptor (GHS-R), have been extensively studied in the last two decades, revealing that ghrelin signaling has important implications in health and disease. Metabolic diseases, such as obesity and diabetes, are often accompanied by low-grade chronic inflammation, that has been coined as "meta-inflammation." Immune cells are key cellular mediators of meta-inflammation, controlling both initiation and resolution of inflammation.

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Feeding modes influence the gut microbiome, immune system, and intestinal barrier homeostasis in neonates; how feeding modes impact susceptibility to neonatal gastrointestinal (GI) diseases is still uncertain. Here, we investigated the impact of dam feeding (DF) and formula feeding (FF) on features of the gut microbiome and physiological inflammation during the first 2 days of postnatal development and on the susceptibility to intestinal injury related to the inflammatory state in neonatal mouse pups. 16S rRNA sequencing data revealed microbiome changes, lower α-diversity, and a distinct pattern of β-diversity including expansion of and in the ileum of FF pups compared with DF pups by postnatal day (P)2.

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Necrotizing enterocolitis (NEC) is a deadly bowel necrotic disease of premature infants. Low levels of plasma IGF-1 predispose premature infants to NEC. While increasing evidence suggests that defective perinatal intestinal microvascular development plays a role in NEC, the involved mechanism remains incompletely understood.

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Chronic low-grade inflammation is a hallmark of aging, which is now coined as inflamm-aging. Inflamm-aging contributes to many age-associated diseases such as obesity, type 2 diabetes, cardiovascular disease, and inflammatory bowel disease (IBD). We have shown that gut hormone ghrelin, via its receptor growth hormone secretagogue receptor (GHS-R), regulates energy metabolism and inflammation in aging.

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Infection with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes COVID-19, a disease that involves significant lung tissue damage. How SARS-CoV-2 infection leads to lung injury remains elusive. The open reading frame 8 (ORF8) protein of SARS-CoV-2 (ORF8) is a unique accessory protein, yet little is known about its cellular function.

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Milk fat globule-EGF factor 8 (MFG-E8) is a secreted glycoprotein that regulates tissue homeostasis, possesses potent anti-inflammatory properties, and protects against tissue injury. The human pancreas expresses MFG-E8; however, the role of MFG-E8 in the pancreas remains unclear. We examined the expression of MFG-E8 in the pancreas at baseline and during cerulein-induced acute pancreatitis in mice and determined whether MFG-E8 attenuates the progression of pancreatitis, a serious inflammatory condition that can be life-threatening.

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Inflammatory bowel disease (IBD) is a devastating relapsing-remitting systemic disease of the gastrointestinal system. It is characterized by an extremely imbalanced immune system and inflammatory mediators that result from the disruption of a complex series of interactions between the microbiome, the mucosal barrier, and the immune system. Over the past decades, numerous animal models such as chemical, genetic and bacterial models have populated to understanding pathophysiology of IBD and preclinical screening of therapeutic compounds for novel treatments.

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Gut injury continues to be the devastating and unpredictable critical illness associated with increased cell death of intestinal epithelial cells (IECs). The IECs, immune system and microbiome are the interrelated entities to maintain normal intestinal homeostasis and barrier integrity. In response to microbial invasion, IEC cell death occurs to maintain intestinal epithelium function and retain the continuous renewal and tissue homeostasis.

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Sirtuin 6 (Sirt6) is predominantly expressed in epithelial cells in intestinal crypts. It plays an important role in protecting intestinal epithelial cells against inflammatory injury. Previously, we found that colitis is associated with the downregulation of Sirt6 protein in the intestines.

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Article Synopsis
  • Prenatal inflammation, specifically through lipopolysaccharide (LPS) injection, negatively impacts the development of neonatal intestinal microvasculature and increases the risk of necrotizing enterocolitis (NEC) in mice.
  • The study revealed that LPS injection led to reduced microvascular density and endothelial cell growth in the intestines, while also increasing levels of tumor necrosis factor (TNF) in both maternal and fetal serum.
  • It was found that TNF decreases vascular endothelial growth factor receptor 2 (VEGFR2) protein expression, which contributes to the adverse effects on intestinal microvasculature and the heightened incidence of severe NEC.
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Necrotizing enterocolitis (NEC) is a devastating disease affecting premature infants with intestinal inflammation and necrosis. The neonatal intestinal inflammatory response is rich in macrophages, and blood monocyte count is low in human NEC. We previously found that NF-κB mediates the intestinal injury in experimental NEC.

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Background & Aims: Inflammation affects regeneration of the intestinal epithelia; long noncoding RNAs (lncRNAs) regulate cell functions, such as proliferation, differentiation, and migration. We investigated the mechanisms by which the lncRNA H19, imprinted maternally expressed transcript (H19) regulates regeneration of intestinal epithelium using cell cultures and mouse models of inflammation.

Methods: We performed RNA-sequencing transcriptome analyses of intestinal tissues from mice with lipopolysaccharide (LPS)-induced sepsis to identify lncRNAs associated with inflammation; findings were confirmed by quantitative real-time polymerase chain reaction and in situ hybridization analyses of intestinal tissues from mice with sepsis or dextran sulfate sodium (DSS)-induced mucosal wound healing and patients with ulcerative colitis compared to healthy individuals (controls).

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Article Synopsis
  • - The study investigated the genetic contributions to food allergies, focusing on maternal and parent-of-origin genetic effects, using data from the Chicago Food Allergy Study involving 588 families.
  • - Researchers identified a significant maternal genetic variant (rs4235235) associated with food allergies, along with three suggestive genetic loci tied to maternal effects and three with parent-of-origin effects, particularly in peanut and egg allergies.
  • - The study emphasizes the need for further family-centric research to validate these findings and enhance understanding of how both maternal and paternal genetics may influence the development of food allergies.
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